Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01612 ATGGCTAGAGAGGTTAACAAGCAAGGCAGAGTTAAGGTTCCTTTCAGCGGAGAAGACACTGCTTCTCTGTTGCAACGATACGATGCACCAACGGTTTTGACGTTGCTTCAGGAATTGGCGAATTATCCGCATTCCAAGTTTAACTGGTATGATTTGGCGGCCAAAACGTCAACCGGAATTTCTAAAGCTAGAGAGTATCAAATGCTGTGGCGACATTTGGCGTATGGTCACTCCATGGAAAATTTGGACGACGATGCTCAACCTTTGGATGATGACAGTGACTTGGAGAACGAACGAGAAGCATTACCCCGCTTAAACAGAGAAACTGCAACCGAAGCTGCAGCATTTGTTAAGGTAATTATTGCATCTTTTAAACTGGGTGAATCCAGTCCTTCGAGTTCAGTGATTGAAGCTCCGTTGACTATAAATGCTCTATCTACCACTGATAACAATGAAAGTTGGAGCAACACCGATATTATTTTTCCAGTAACAGTGAAGAGACAGACACTGCCAAATACATCATCAACCAGAGTTGTAGAAGCCAGTGGTTCAGTCCGTAGTAACACATTTATTAAAAAGAAAAGAGAACCATGGTCGGAGCAAGAAGACCTGCAATTACGAGATGCCGTTCAGAGATGGGGTGAAGGTAACTGGGCAACTATGATTAAGAAAGATGACTTCCCTATCAAGAGGAGCACCTCACAATTATCTAAGAGGTGGAGCACATTGCGAAAGAGAGAAGGCGACATCAATTGA 756 0.4339 MAREVNKQGRVKVPFSGEDTASLLQRYDAPTVLTLLQELANYPHSKFNWYDLAAKTSTGISKAREYQMLWRHLAYGHSMENLDDDAQPLDDDSDLENEREALPRLNRETATEAAAFVKVIIASFKLGESSPSSSVIEAPLTINALSTTDNNESWSNTDIIFPVTVKRQTLPNTSSTRVVEASGSVRSNTFIKKKREPWSEQEDLQLRDAVQRWGEGNWATMIKKDDFPIKRSTSQLSKRWSTLRKREGDIN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01612 251 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 6 251 - -
Viun8g01612 251 CDD SANT_TRF 197 245 - -
Viun8g01612 251 ProSiteProfiles Myb-like domain profile. 190 244 IPR001005 -
Viun8g01612 251 SUPERFAMILY Homeodomain-like 192 245 IPR009057 -
Viun8g01612 251 Pfam Myb-like DNA-binding domain 195 243 IPR001005 -
Viun8g01612 251 SMART sant 194 246 IPR001005 -
Viun8g01612 251 Gene3D - 190 249 - -
Viun8g01612 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 192 248 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01612 Viun-Chr8 27064992 27069226 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun8g01612 Myb_DNA-binding 3.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01612 - - gmx:100819057 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01612 8 27064992 27069226 Viun8g01612 8 27064992 27069226 ECH
Viun8g01612 8 27064992 27069226 Viun9g02659 9 35533104 35542326 PCT