Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01603 ATGAACAACGCGACACGCAACGAAGCGGAGCGTCTCCTTGGGATCGCGGAGAAGCTTCTCCAGAACCGTGATTTGATGGGTTCGCGCGAGTTCGCCATTCTCGCGCAGGAAACTGAGCCTCTTCTCGAAGGTTCCGACCAGATCCTCGCCATCGTCGACGTGCTCCTCGCCGCCGACAAGCGCGTCAACAACCACCCAGACTGGTACGCCATCCTTCAGGTCGATCGGCGGTCCGACGACCTTGACCTCATAAAGAAACAGTACCGCCGCCTTGCGCTCCTCCTCCACCCCGACAAGTCCCGCTTCGCCTACGCTGACCACGCCTTCAAGCTCGTCGCCGACGCGTGGGCTCTATTTGCCGATCCCGTGAAGAAGGCAGTGTACGACAAAGAGCTCTCGTTCTACTCCCGCGTCGATTTGTCTGTCCCCGGATGGGTCCAGCAGGAAAAGCTCTCAGTCCGCAGGCCTGGGCCTGGGCCTGGGCCCGAACCCGGACCAAGCACCCGCAACAGTGCCTCGGCCCGCGACCAGATTCACGCTGATGAAAGTTCTCGCAGGAGAAACTCAACATTCTGGACCGCGTGTCCCTACTGTTACCGTTTGTATGAATACCCTAGGGTTTACGAGGGTAATTGTCTACGGTGCCAGAATTGCGATAGATCCTTCCATGGCGTGGCGGTTCCGACGCTGCCGCCGCTGGTCCCCGGCCAGGACGCGTATTATTGCTGCTGGGGCTTCTTCCCCATGGGATTTGTAATGGGTAACTTTGGTTCTCCGGAGAAAGAGGCGGAGGTGACAGTGCCTGCACCGCAACCCCCTCCTCCGCCTCCGCCCGCGTCTCAACCGGCTTCTTCTCTGCCGAATTGGATGCCCGTACCGGCGAATAACGGTGCGCAGGCGACGCCGGTGCCAGCGAGGGTGACTAGGTCGGCGGCGACGGTGGCCGCGAGAGCGCCGAACGGGACTGGGCCGAAGAAGAGGGGGAGACCAAGGAAGTATCCGTTGCAGTCGTGA 1014 0.6095 MNNATRNEAERLLGIAEKLLQNRDLMGSREFAILAQETEPLLEGSDQILAIVDVLLAADKRVNNHPDWYAILQVDRRSDDLDLIKKQYRRLALLLHPDKSRFAYADHAFKLVADAWALFADPVKKAVYDKELSFYSRVDLSVPGWVQQEKLSVRRPGPGPGPEPGPSTRNSASARDQIHADESSRRRNSTFWTACPYCYRLYEYPRVYEGNCLRCQNCDRSFHGVAVPTLPPLVPGQDAYYCCWGFFPMGFVMGNFGSPEKEAEVTVPAPQPPPPPPPASQPASSLPNWMPVPANNGAQATPVPARVTRSAATVAARAPNGTGPKKRGRPRKYPLQS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01603 337 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 291 - -
Viun8g01603 337 Pfam DnaJ domain 67 129 IPR001623 -
Viun8g01603 337 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Viun8g01603 337 SUPERFAMILY FYVE/PHD zinc finger 188 243 IPR011011 -
Viun8g01603 337 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Viun8g01603 337 MobiDBLite consensus disorder prediction 266 284 - -
Viun8g01603 337 Gene3D DnaJ domain 56 140 IPR036869 -
Viun8g01603 337 MobiDBLite consensus disorder prediction 151 182 - -
Viun8g01603 337 PRINTS DnaJ domain signature 104 124 IPR001623 -
Viun8g01603 337 PRINTS DnaJ domain signature 88 103 IPR001623 -
Viun8g01603 337 PRINTS DnaJ domain signature 69 87 IPR001623 -
Viun8g01603 337 MobiDBLite consensus disorder prediction 262 337 - -
Viun8g01603 337 CDD DnaJ 67 116 IPR001623 -
Viun8g01603 337 SMART dnaj_3 66 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01603 Viun-Chr8 26935090 26936612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01603 2 335 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 47.619 4.02e-102 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01603 - - gmx:100816918 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01603 8 26935090 26936612 Viun8g01603 8 26935090 26936612 ECH