Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun8g01598 | ATGTTCTCAAAACTTCATCCACAACACCAACCTTTTCAATTCTCCCGGGAATGTCAAACATCCGAGGACGATGACAGCCGGAATAGCGGTGGGCCTAACCTCGCGGCCCAGAAGCCCGTCTCCGCAGGCGATGGAGCTACAATTGAAGTAGTGCGGCGGCCCAGGGGCCGCCCTCCGGGCTCCAAAAACAAGCCCAAGCCGCCTCTTATTATTACCCGCGAGCCGGACCCCTCCATGAGTCCCTTCATTTTAGAAATCCCCGGCGGAAACGACGTCGTCGATGCCCTAGCCCGGTTCAGCCGCAGAAAGAACACGGGCCTCTGTGTCCTCACCGGTTCGGGAACTGTCGGTAATGTTACTCTCCGCCAACCCTCCGTCGCTCCCGCCGGCACTGTTACCTTCCATGGCCGCTTCGACATCCTCTCCATGTCCGCCACCTTCCTCCTCCACGCACCCCCGCCGCCGGTCCCTCCCTCCACCTTCTCCGTCTCGCTCGCCGGACCGCAGGGGCAGATCGTCGGCGGACACGTCGCTGGAAGGCTGCTCGCTGCTGGGACGGTGTTCATCATCGCCGCCTCGTTCAACAACCCCTCCTTCCACCGGCTCTCGTCGGAGGACGACGCGCAGAATAACTCCGCGTCCGGCGGCGGTGTCGGCGATGCGCAGTCACCCCCCGTCTCTGGTGGCGGCGCGGAGAGCGGACAACTTCCGGCGGAGTCGTGTATGTACAGCTGCCACCTCCCTTCGGATGTGATTTGGGCTCCGACGGCTCGACCACCTTTCTGA | 786 | 0.6272 | MFSKLHPQHQPFQFSRECQTSEDDDSRNSGGPNLAAQKPVSAGDGATIEVVRRPRGRPPGSKNKPKPPLIITREPDPSMSPFILEIPGGNDVVDALARFSRRKNTGLCVLTGSGTVGNVTLRQPSVAPAGTVTFHGRFDILSMSATFLLHAPPPPVPPSTFSVSLAGPQGQIVGGHVAGRLLAAGTVFIIAASFNNPSFHRLSSEDDAQNNSASGGGVGDAQSPPVSGGGAESGQLPAESCMYSCHLPSDVIWAPTARPPF | 261 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun8g01598 | 261 | PIRSF | ESCAROLA | 2 | 252 | IPR014476 | GO:0003680 | |
Viun8g01598 | 261 | MobiDBLite | consensus disorder prediction | 201 | 218 | - | - | |
Viun8g01598 | 261 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 78 | 206 | - | - | |
Viun8g01598 | 261 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Viun8g01598 | 261 | ProSiteProfiles | PPC domain profile profile. | 76 | 215 | IPR005175 | - | |
Viun8g01598 | 261 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 22 | 229 | IPR014476 | GO:0003680 | |
Viun8g01598 | 261 | MobiDBLite | consensus disorder prediction | 201 | 236 | - | - | |
Viun8g01598 | 261 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Viun8g01598 | 261 | CDD | DUF296 | 81 | 194 | IPR005175 | - | |
Viun8g01598 | 261 | Gene3D | - | 80 | 212 | - | - | |
Viun8g01598 | 261 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 81 | 196 | IPR005175 | - | |
Viun8g01598 | 261 | FunFam | AT-hook motif nuclear-localized protein | 80 | 213 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun8g01598 | Viun-Chr8 | 26847899 | 26849255 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun8g01598 | 44 | 260 | AT-hook Motif Nuclear Localized (AHL) Family | AT5G49700 | 64.935 | 2.15e-95 | 280 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun8g01598 | - | - | gmx:100811053 | 407.527 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun8g01598 | 8 | 26847899 | 26849255 | Viun8g01598 | 8 | 26847899 | 26849255 | ECH | |
Viun8g01598 | 8 | 26847899 | 26849255 | Viun9g01937 | 9 | 29277674 | 29279783 | PCT |