Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01589 ATGATGTGGGAATGGGGCGATTACGAAGACGCCATCCCAGAATCCGACCAACCCGAACCCGATTCTCATCTCAACTTCGATTTCTTCTCCGCCCTTGCTAAACCCAAGGATTATTACAAGATACTGGAAGTGGATTATGATGCTACGGATGATGATATTCGCTCCAATTACATTCGTCTTGCTCTGAAGTGGCACCCGGACAAGCAGAAAGACCAGGATTCTACTACCTCGCGATTCCAAGACATAAACGAAGCCTACCAGGTTTTGAGTGATCCAGTCAAAAGGAGGGATTATGACATAAACGGAATGCGTTATGAATATGATTACAATATCATTGATTATCTTAATCGTTATAAGGGCCTTATCTTGACTTGCAATGGCCTTGGCATAAAGCATTCGATATGGTAA 408 0.4314 MMWEWGDYEDAIPESDQPEPDSHLNFDFFSALAKPKDYYKILEVDYDATDDDIRSNYIRLALKWHPDKQKDQDSTTSRFQDINEAYQVLSDPVKRRDYDINGMRYEYDYNIIDYLNRYKGLILTCNGLGIKHSIW 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01589 135 Gene3D DnaJ domain 29 114 IPR036869 -
Viun8g01589 135 Pfam DnaJ domain 37 99 IPR001623 -
Viun8g01589 135 MobiDBLite consensus disorder prediction 1 20 - -
Viun8g01589 135 SMART dnaj_3 36 94 IPR001623 -
Viun8g01589 135 PRINTS DnaJ domain signature 57 72 IPR001623 -
Viun8g01589 135 PRINTS DnaJ domain signature 74 94 IPR001623 -
Viun8g01589 135 PRINTS DnaJ domain signature 39 57 IPR001623 -
Viun8g01589 135 SUPERFAMILY Chaperone J-domain 33 121 IPR036869 -
Viun8g01589 135 FunFam Chaperone protein DNAj, putative 29 116 - -
Viun8g01589 135 CDD DnaJ 37 91 IPR001623 -
Viun8g01589 135 ProSitePatterns Nt-dnaJ domain signature. 79 98 IPR018253 -
Viun8g01589 135 ProSiteProfiles dnaJ domain profile. 37 102 IPR001623 -
Viun8g01589 135 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01589 Viun-Chr8 26621442 26624283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01589 30 99 C2H2 Transcription Factor Family AT1G74250 38.667 2.32e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01589 - - var:108338470 286.96