Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01588 ATGATGTGGGAATGGGGCGATTACGAAGACGCCATCCCAGAATCCGACCAACCCGAACCCGATTCTCATCTCAACTTCGATTTCTTCTCCGCCCTTGCTAAACCCAAGGATTATTACAAGATACTGGAAGTGGATTATGATGCTACGGATGATGATATTCGCTCCAATTACATTCGTCTTGCTCTGAAGTGGCACCCGGACAAGCAGAAAGACCAGGATTCTACTACCTCGCGATTCCAAGACATAAACGAAGCCTACCAGGCTTTTTGCACAGTTTTGAGTGATCCAGTCAAAAGGAGGGATTATGACATAAACGGAATGCGTTATGAATATGATTACAATATCATTGATTATCTTAATCGTTATAAGGGCCTTATCTTGACTTGCAATGGCCTTGGCATAAAGCATTCGATATGGTAA 420 0.431 MMWEWGDYEDAIPESDQPEPDSHLNFDFFSALAKPKDYYKILEVDYDATDDDIRSNYIRLALKWHPDKQKDQDSTTSRFQDINEAYQAFCTVLSDPVKRRDYDINGMRYEYDYNIIDYLNRYKGLILTCNGLGIKHSIW 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01588 139 CDD DnaJ 37 95 IPR001623 -
Viun8g01588 139 Gene3D DnaJ domain 29 118 IPR036869 -
Viun8g01588 139 MobiDBLite consensus disorder prediction 1 20 - -
Viun8g01588 139 PRINTS DnaJ domain signature 39 57 IPR001623 -
Viun8g01588 139 PRINTS DnaJ domain signature 74 94 IPR001623 -
Viun8g01588 139 PRINTS DnaJ domain signature 57 72 IPR001623 -
Viun8g01588 139 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 139 - -
Viun8g01588 139 ProSiteProfiles dnaJ domain profile. 37 106 IPR001623 -
Viun8g01588 139 FunFam Chaperone protein DNAj, putative 29 120 - -
Viun8g01588 139 SUPERFAMILY Chaperone J-domain 33 125 IPR036869 -
Viun8g01588 139 SMART dnaj_3 36 98 IPR001623 -
Viun8g01588 139 Pfam DnaJ domain 37 103 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01588 Viun-Chr8 26621442 26624292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01588 30 103 C2H2 Transcription Factor Family AT1G74250 36.709 6.25e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01588 - - var:108338470 281.182