Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01587 ATGATGTGGGAATGGGGCGATTACGAAGACGCCATCCCAGAATCCGACCAACCCGAACCCGATTCTCATCTCAACTTCGATTTCTTCTCCGCCCTTGCTAAACCCAAGGATTATTACAAGATACTGGAAGTGGATTATGATGCTACGGATGATGATATTCGCTCCAATTACATTCGTCTTGCTCTGGTGTGTTGTGTTGTAAGCGTTTTCCTTTTGTTGGGTTTCCGATTGGGGCTAATGTGGGTGTGGTTGTGCGCGCAGAAGTGGCACCCGGACAAGCAGAAAGACCAGGATTCTACTACCTCGCGATTCCAAGACATAAACGAAGCCTACCAGGTTTTGAGTGATCCAGTCAAAAGGAGGGATTATGACATAAACGGAATGCGTTATGAATATGATTACAATATCATTGATTATCTTAATCGTTATAAGGGCCTTATCTTGACTTGCAATGGCCTTGGCATAAAGCATTCGATATGGTAA 483 0.4431 MMWEWGDYEDAIPESDQPEPDSHLNFDFFSALAKPKDYYKILEVDYDATDDDIRSNYIRLALVCCVVSVFLLLGFRLGLMWVWLCAQKWHPDKQKDQDSTTSRFQDINEAYQVLSDPVKRRDYDINGMRYEYDYNIIDYLNRYKGLILTCNGLGIKHSIW 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01587 160 CDD DnaJ 37 116 IPR001623 -
Viun8g01587 160 Gene3D DnaJ domain 29 138 IPR036869 -
Viun8g01587 160 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 64 - -
Viun8g01587 160 SMART dnaj_3 36 119 IPR001623 -
Viun8g01587 160 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Viun8g01587 160 SUPERFAMILY Chaperone J-domain 86 146 IPR036869 -
Viun8g01587 160 ProSiteProfiles dnaJ domain profile. 37 127 IPR001623 -
Viun8g01587 160 Pfam DnaJ domain 85 124 IPR001623 -
Viun8g01587 160 PRINTS DnaJ domain signature 39 57 IPR001623 -
Viun8g01587 160 PRINTS DnaJ domain signature 82 97 IPR001623 -
Viun8g01587 160 PRINTS DnaJ domain signature 99 119 IPR001623 -
Viun8g01587 160 SUPERFAMILY Chaperone J-domain 30 63 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01587 Viun-Chr8 26621442 26624302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01587 30 124 C2H2 Transcription Factor Family AT1G74250 29.000 4.73e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01587 - - var:108338470 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01587 8 26621442 26624302 Viun8g01587 8 26621442 26624302 ECH