Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01584 ATGGCACCCAGTTTTGATTGCTTTTCAAGCCTTCTCTGTGCGGAAGATAATATTATTTTTGACGAAAATGATCGGGGAGGTTTGGTGGAGGAGTTGGAGGACACGTGGGAGCATCCTATATATGATCGAAATCATAGTCAAATTCAGAACTTGGATGTTCAATATGTGTCGTTTCCTTTGCCGAGTGAGGAGTGTTTGAGACTAATGATGGAATCAGAATTGCATCACTTGCCTAATGGTGATTACGTTAGTAGGCTGAGGAGTGGGGATTTGGACATTGGGTCTAGAACAGAGGCCATTGATTGGATTGAAAAGGTCCGAGAGCACTTTGGTTTTGGACCTCTCTGTGCTTATCTATCCATAAATTACTTGGACCGTTTCCTCTCTGTTTATGAATTACCACAACGAGTTTGGACAATGAAATTGTTGGCTGTAGGTTGCATATCTCTGGCAGCCAAAATGGAAGAGAGTGATGTGCCTACATCTCTTGATTTGCAGGTGGGTGAATCTAAGTATATATTTGAAGCCAAAACAATTCAGAGAATGGAGCTTCTTGTTCTGAACACATTGAAGTGGAGAATGCAGGCAATTACCCCATTTTCCTTCATCGACTATTTCCTTCAGAAGATCAATGATGATGATGAAGCTCCAATTGGAGCTTCAATTTTGCAATCCTCAGAGCTTATACTGAGTACTGTAAGAGGAATTGACTTCATAGAGTTCAGACCCTCAGAGATTGCAGCTGCAGTGGCAATATCTGTGGTGGGGGATGGCCAAACAGTTGAAACAGAGAAAGCAAGTTCTGATCTGATTCAGCATGTAGAAAAGGAGAGGGTGTTGAAGTGTGTGAAAATGATCCAAGAACTTTCATCAAAGAATGGTCCTTCTGCTAAGGATTTGATTCCTTCTGTTTCTGTGCCTGAAAGCCCAATAGGGGTGTTGAACAATGCATGCTTCAGCTACAAAAGTGATGAACCAAACGTTGCTCCTTGTGCAAACTCTTCACATAGTGATACTCCAGATGCTAAAAGGAGGAAGCTAGACAAAACCTTTGGAGAATAG 1062 0.419 MAPSFDCFSSLLCAEDNIIFDENDRGGLVEELEDTWEHPIYDRNHSQIQNLDVQYVSFPLPSEECLRLMMESELHHLPNGDYVSRLRSGDLDIGSRTEAIDWIEKVREHFGFGPLCAYLSINYLDRFLSVYELPQRVWTMKLLAVGCISLAAKMEESDVPTSLDLQVGESKYIFEAKTIQRMELLVLNTLKWRMQAITPFSFIDYFLQKINDDDEAPIGASILQSSELILSTVRGIDFIEFRPSEIAAAVAISVVGDGQTVETEKASSDLIQHVEKERVLKCVKMIQELSSKNGPSAKDLIPSVSVPESPIGVLNNACFSYKSDEPNVAPCANSSHSDTPDAKRRKLDKTFGE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01584 353 Pfam Cyclin, N-terminal domain 66 194 IPR006671 -
Viun8g01584 353 Pfam Cyclin, C-terminal domain 197 296 IPR004367 -
Viun8g01584 353 FunFam D2/4-type cyclin 79 190 - -
Viun8g01584 353 CDD CYCLIN_AtCycD-like_rpt2 197 286 - -
Viun8g01584 353 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Viun8g01584 353 PANTHER CYCLINS 67 291 IPR039361 -
Viun8g01584 353 Gene3D - 79 195 - -
Viun8g01584 353 MobiDBLite consensus disorder prediction 338 353 - -
Viun8g01584 353 FunFam D6-type cyclin 191 284 - -
Viun8g01584 353 SUPERFAMILY Cyclin-like 179 289 IPR036915 -
Viun8g01584 353 CDD CYCLIN_AtCycD-like_rpt1 96 192 - -
Viun8g01584 353 Gene3D - 67 285 - -
Viun8g01584 353 SUPERFAMILY Cyclin-like 58 194 IPR036915 -
Viun8g01584 353 SMART Cyclin_C_2 197 304 IPR004367 -
Viun8g01584 353 SMART cyclin_7 101 188 IPR013763 -
Viun8g01584 353 MobiDBLite consensus disorder prediction 328 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01584 Viun-Chr8 26559025 26561843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01584 26 332 Core Cell Cycle Gene Families AT2G22490 45.597 1.11e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01584 K18810 - gmx:100803873 528.094