Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01577 ATGCGCTACCTCACTTGCAACGCCGAGACAGCAATAGCCATATGCCATCCTCACTCCCCCAAGAAGAACAAAAAGCCCGCAAGCCCAACGCAGGCCCAAACCGTGCCACACTTCGCCTACTCCGACATCGTCGCCGCCACCAACGCCTTCTCCGCTGGCAACTTCTTAGGCAAAGGCAGCCACGGCAGCGTCTACAAAGCCATCCTCCACGGCGGCGCGCTCATCGCCGCCGTCAAAATAACCAAACCTTCTAAGGAGATAGAAATTCTCTCCAACCTCAAAAGCCGACGCTTGGTCAACCTAATTGGCTTCTGCAACGACCGAACTAACTGCAACAATAACAAACTCATTGTTGTGGAGTACATGCCCAACGGTTCGCTCCACGACCTCCTCCACTCCACCAAAACGGTTGGGCCTCCCGGTTGGACCGCACGTGTCCGGTTCGCGGTTCAAGTCGCGAAAGCGGTTCGCTTTTTGCACTCGTCTGAACCGCCCGTTATTCACCGTGATATTAAATCGTCCAACGTGTTAATCGACCAGAAGTGGAAAGCGCGACTCGGTGACTTCGGACTCGCGTTTCGAGGATACGTGGCGGATTCTCGCGTGCCGCCAGCGGGAACGTTAGGGTACCTCGACCCGTGCTATCTTGCGCCGGGGGACTTGAGTCCCAAGAGCGATGTCTTCAGTTTTGGAATCTTGCTGCTGGAGATAGCGAGTGGGAGGCACGCGATTGACGTGAGGCACAGTCCGCCGTCGGTGTTGGACTGGGCGGTGCCGTTGGTCCGCCGTGGCCACTTTCGGGAGATTTGCGACCCGCGGATCGGGGCCCCGCCGGACATGGCAGCGTTCCGGAGGATGATGGTGCTAGCCTCGAGGTGCGTGACATCAACGGCGGAGAGACGGCCGACGATTGCGGAGGTGGTGGAGTGTCTGACGGCGGTAAAGAAGAATTTTGACGAGTCGCTGATGTGGATGAGAATGAAACGGAGCGTGGTGAAGGCGCGTGGCGATTGGTTCCCTTATAGGGACAGGAGTGAGGAATCTGTGAGAATAGACAAAGGTGGGAGTAGAAACTGTAGACGGAATGGGAAGGTATCTAGTGTGTTGGGTGTAGAGTATGATAATGGAGCCGCGAATCGTGCGGTTAGGTGTAAATCCGTTGGTTCTGTTTTTTTCAGGGAAATGAAAATTAACTCGGTTATGGAACGGTTCCCTAACCAATTTGGGTTCGGGTATAGGAAGGTAAGGCTAAAGAGATCGAGGTCTGTGGGGCTTTTGGAACATTATGGTAATGAATCGAATACGTGTCATGAGAGGCATAACGATACTCATAATAATGATTATGATAGAGTGAGTTCCACAGAGATGGAAGTTTCCAAGTTGGGTATTGTGGATAAGAATTTGGACTAG 1410 0.5348 MRYLTCNAETAIAICHPHSPKKNKKPASPTQAQTVPHFAYSDIVAATNAFSAGNFLGKGSHGSVYKAILHGGALIAAVKITKPSKEIEILSNLKSRRLVNLIGFCNDRTNCNNNKLIVVEYMPNGSLHDLLHSTKTVGPPGWTARVRFAVQVAKAVRFLHSSEPPVIHRDIKSSNVLIDQKWKARLGDFGLAFRGYVADSRVPPAGTLGYLDPCYLAPGDLSPKSDVFSFGILLLEIASGRHAIDVRHSPPSVLDWAVPLVRRGHFREICDPRIGAPPDMAAFRRMMVLASRCVTSTAERRPTIAEVVECLTAVKKNFDESLMWMRMKRSVVKARGDWFPYRDRSEESVRIDKGGSRNCRRNGKVSSVLGVEYDNGAANRAVRCKSVGSVFFREMKINSVMERFPNQFGFGYRKVRLKRSRSVGLLEHYGNESNTCHERHNDTHNNDYDRVSSTEMEVSKLGIVDKNLD 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01577 469 ProSiteProfiles Protein kinase domain profile. 50 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01577 469 Pfam Protein kinase domain 53 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01577 469 Gene3D Transferase(Phosphotransferase) domain 1 122 333 - -
Viun8g01577 469 SMART serkin_6 50 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01577 469 PANTHER OS01G0253100 PROTEIN 25 315 - -
Viun8g01577 469 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Viun8g01577 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Viun8g01577 469 SUPERFAMILY Protein kinase-like (PK-like) 34 319 IPR011009 -
Viun8g01577 469 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01577 Viun-Chr8 26408646 26411046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01577 38 311 Receptor kinase-like Gene Family AT3G59420 39.863 9.48e-60 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Viun8g01577 Pkinase 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01577 - - vun:114194010 955.281