Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01539 ATGGCCAGCGCTCCCTCTCCACGCGAAGAGTTCGTGTACATGGCCAAGCTGGCGGAGCAAGCCGAGCGCTACGAGGAGATGGTGGAGTTCATGGAGAAGGTCTCTGCCGCCGCCGAGAACGAGGAGCTCACGGTGGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTCATCGGTGCCAGACGTGCCTCCTGGCGCATCATCTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGCAACGAGGACCACGTCGCCGTCATCCGCGACTACCGATCCAAGATCGAGAGCGAACTCTCCAACATCTGCGACGGAATCCTCAAGCTCCTTGACTCGCGCCTCGTTCCCTCTGCTGCCTCTGGTGACTCCAAGGTCTTTTACCTCAAAATGAAGGGCGACTACCACAGGTACCTCGCCGAGTTCAAGACCGGTGCCGACCGCAAAGAGGCCGCTGAGAGCACGCTCTCCGCCTACAAATCTGCACAGGACATTGCAAACTCTGAGCTGCCTCCAACTCACCCTATTAGGCTTGGTCTTGCTCTGAACTTCTCTGTCTTTTACTATGAGATTCTTAATTCTCCTGATCGGGCTTGCAGCCTTGCAAAACAGGCTTTTGACGAGGCAATTGCTGAATTGGATACACTGGGAGAGGAGTCATACAAGGACAGCACTTTGATCATGCAACTTCTTCGTGATAACCTTACCCTCTGGACCTCTGACATGCAGGATGACGGTGCAGATGAAATTAAAGAAGCCGCGCCTAAAGGGGACGGGGAACAAAATTAA 786 0.5509 MASAPSPREEFVYMAKLAEQAERYEEMVEFMEKVSAAAENEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGILKLLDSRLVPSAASGDSKVFYLKMKGDYHRYLAEFKTGADRKEAAESTLSAYKSAQDIANSELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKGDGEQN 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01539 261 Coils Coil 14 41 - -
Viun8g01539 261 Gene3D - 2 251 IPR036815 -
Viun8g01539 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Viun8g01539 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Viun8g01539 261 PIRSF 14-3-3 2 250 IPR000308 -
Viun8g01539 261 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Viun8g01539 261 FunFam 14-3-3 protein epsilon 4 251 - -
Viun8g01539 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Viun8g01539 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Viun8g01539 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Viun8g01539 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Viun8g01539 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Viun8g01539 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Viun8g01539 261 SMART 1433_4 8 251 IPR023410 -
Viun8g01539 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Viun8g01539 261 Pfam 14-3-3 protein 14 238 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01539 Viun-Chr8 25623568 25626040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01539 6 261 14-3-3 family AT1G78300 89.494 2.80e-170 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01539 K06630 - gmx:100794129 501.516