Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01521 ATGAAACTGCAAAACAACCACAAAATGCTCAATTTTCAGAAACTGTCTCTTCTACTGACGTTGCTGTTTCTGGTAGTGAAGCCTGCAACGGCCAAGAACCTCTGCGCGGATAAATGTGGTCACGTTCGTATTGAATTTCCATTTTATCTCAGAAATAAAAACTTGAATCACACCACCGACTACCCTCCTGAATTCGGTCTATTATGCTCCCAACAAAATGAGCCCATGCTGAAGCTGCCTGCTGTTCCAATACCATTGTTTGTCAGAAAAATTGATTATAAATCTACGCTAATTGAAATATATGACCCCCAAAATTGCCTTGCTGATCTACTCTTGAAACTCAACAACGCGTCCATCTCTCCATTCCGATTCGTCAAATATTTTGGTCGTCCTCCTCCCGTCTTTGACGTTTCCTTCTTCCGTTGCGACTCATTGTCGTGCCCTATTTCGCTACTAGAATCCCACAACGACGTCGTTGACCCCCGATTAGTATCCTGCACGAAGCTGAAAGATGTTTCCGTGGAATGGTGGTGGTCTTGGTATTTTCAGCAGAAGCTTTTTATGGAATGGTCCAAACCTGACTGTGGATACTGTGAAGCACAAGGCCTAAAATGTAAATGGAAGAATGGTACTAACGGTGCAACTGAATGTTATGCTTGCCGAACAAAAAGGATTCCCACGTCAACTGTCGTCCACATTGCTACAGGAGTAGTAGTTGGTTTGATACTTTTGCTGCTACTGGTCAAGGCATTGTTTTATGCGTATGAATATTATGAGAAGAGAGGAGAAGACCAGACTCGAATAGAGAGATTCTTGGAGGATTACAGGGCAATGAAGCCTACCAGGTTCACTTATGCTGACATCAAGAGAATCACAAATGGGTTTAGTGAGGGTTTAGGGGAAGGATCTCATGGAGCAGTGTTCAAAGGAATGCTCTCCCGTGAAATTCTTGTTGCTGTGAAGATACTCAAAGATACAGTGGGAGATGGGAAGGATTTCATAAATGAAGTGAGAGCCATTGGGAAAATTCATCACGTTAATATTGTTCGCTTGCTTGGTTTCTGTGCAGATGAGTTCCACCGTGCTCTCGTCTACGATTTCTTTCCAAATGGGTCGTTGCAGAGATTCTTGGCTCCACCGGACAAGAAGGATGTTTTCCTTGGTTGGGAGAAGTTGCAACAAATTAGTCTTGGTATTGGCAGAGGGATTGAGTATCTCCACCTTGGCTGTGATCATAGAATTCTTCACTTTGACATCAATCCTCACAATGTTTTGCTAGATGACCTTTTTGTCCCAAAAATCACTGATTTTGGACTAGCCAAGTTGTGTCCCAAAAATCAGAGCACGGTGTCCATGACTGCAGCCAGGGGAACTTTGGGCTACATTGCCCCTGAAGTTTTCTCTCGGAACTTTGGTAATGTGTCATACAAGTCGGACATTTACAGCTATGGAATGTTGCTGTTAGAAATGGTTGGAGGAAGAAAGAATACAAATGTTTCAGTTCAGGACAGTTTCCAAATTCTGTACCCAGAGTGGATCCACAACTTGGTGGAAGGAAAAGATATGGAAATTAGCGTTGAGGATGAGGGAGATGCTAAAATTGCCAAGAAACTTGCCATTGTAGGACTTTGGTGCATTCAATGGAACCCAGCGGATCGTCCTTCCATGAAAACTGTGGTACAAATGCTTGAAGGGGATGGACATGAGTTAGTAGCACCCCCTTCTCCTTTTCATATTTCTGGTTCTTCTACAGCAAAAACTGTTGTTCCGACAAGACGTCAAAATTTTGAGTTGGAGGTTATTCATGAAATAGAAGAAAACAATGTCGATCACTTTTAG 1839 0.4279 MKLQNNHKMLNFQKLSLLLTLLFLVVKPATAKNLCADKCGHVRIEFPFYLRNKNLNHTTDYPPEFGLLCSQQNEPMLKLPAVPIPLFVRKIDYKSTLIEIYDPQNCLADLLLKLNNASISPFRFVKYFGRPPPVFDVSFFRCDSLSCPISLLESHNDVVDPRLVSCTKLKDVSVEWWWSWYFQQKLFMEWSKPDCGYCEAQGLKCKWKNGTNGATECYACRTKRIPTSTVVHIATGVVVGLILLLLLVKALFYAYEYYEKRGEDQTRIERFLEDYRAMKPTRFTYADIKRITNGFSEGLGEGSHGAVFKGMLSREILVAVKILKDTVGDGKDFINEVRAIGKIHHVNIVRLLGFCADEFHRALVYDFFPNGSLQRFLAPPDKKDVFLGWEKLQQISLGIGRGIEYLHLGCDHRILHFDINPHNVLLDDLFVPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNVSVQDSFQILYPEWIHNLVEGKDMEISVEDEGDAKIAKKLAIVGLWCIQWNPADRPSMKTVVQMLEGDGHELVAPPSPFHISGSSTAKTVVPTRRQNFELEVIHEIEENNVDHF 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01521 612 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Viun8g01521 612 ProSiteProfiles Protein kinase domain profile. 293 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01521 612 SUPERFAMILY Protein kinase-like (PK-like) 273 564 IPR011009 -
Viun8g01521 612 Gene3D Phosphorylase Kinase; domain 1 268 367 - -
Viun8g01521 612 FunFam serine/threonine-protein kinase PBS1-like 261 367 - -
Viun8g01521 612 PANTHER RUST RESISTANCE KINASE LR10-RELATED 265 582 IPR045874 GO:0004672
Viun8g01521 612 FunFam PR5-like receptor kinase 368 574 - -
Viun8g01521 612 Gene3D Transferase(Phosphotransferase) domain 1 368 570 - -
Viun8g01521 612 Pfam Protein kinase domain 297 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01521 612 Pfam Wall-associated receptor kinase galacturonan-binding 35 102 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01521 Viun-Chr8 25179327 25181995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01521 191 576 Receptor kinase-like Gene Family AT1G66910 41.960 6.22e-99 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun8g01521 Pkinase 3.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01521 - - var:108338466 994.571