LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun8g01518	ATGGCTGTCTTACCTTGTTGCAGTCGCTGCGCACAATCGGTGGTTGTCTCTGTTGCCACCATTCTTGTGCTATTTCACCAAACTTGCAGTGCCAAGCATCGCACCTCCTGTCCATCTTCTTCGTGCGGCGAAATTCGCGACATAAGATATCCATTCCGACTGAAAAACGACCCTCGCGGTTGCGGCCTTCCCGGGTACGAATTTGAGTGCGTGAATAACAGAACACTGTTTACTCTGTTTTCAGGGAAATACTTTGTGGAGGAAATCAATTACGATAGGTATCAAATCCGGCTGATTGATCCGGGCGTTGTGAAGGACACTTCTTGCTCTTTTCCTCGCTATTTCTTGTGCACACGAAATTTCAGTGGATTTGATTATGATCCGCTGGCTATGTCTGGGGAGAAGTATGTGTTTGGGGAGGAGTATAAGTATAAGCCTGCAAAAGTAGTGTTTCTGAACTGCAGTAATGGAGTGAGTGATGATCCTCGATATGTGGAAGTGAAAGCCGACGGTTGTGATTCCGGGGGCCATATCTACGCCGTTCTGGTTGGCGGGGTTACCGCTGAGGGGTTTCCGGCGGTATTTACAGGGATGGACGTGAAGGTCGGGTGCAGATTGAAGGTTGCTACCTTCGCAAACTGGACACATGACAGGAAGGACTCCTGTGCTGTTATCCTCAAATCTCTTGAAGAAGGGTTTTGGTTGACTTGGTTACGACTTGCTTGTTGGGATCAGTGTGGAAAGGGTATGTCTTGCGCCTTCAATCAAACCACACAACAACTTCAATGCACCGATTGTGATATGTTCCACTTCTATATCCGGAATTGCGGAAATTTATCACGAATTGAAGGATACCTTACAGGTACGCGCACTAAACCATATGTCATCATTAACTTCTATCGAAACTATTTTCTCCATCCATAG	924	0.4665	MAVLPCCSRCAQSVVVSVATILVLFHQTCSAKHRTSCPSSSCGEIRDIRYPFRLKNDPRGCGLPGYEFECVNNRTLFTLFSGKYFVEEINYDRYQIRLIDPGVVKDTSCSFPRYFLCTRNFSGFDYDPLAMSGEKYVFGEEYKYKPAKVVFLNCSNGVSDDPRYVEVKADGCDSGGHIYAVLVGGVTAEGFPAVFTGMDVKVGCRLKVATFANWTHDRKDSCAVILKSLEEGFWLTWLRLACWDQCGKGMSCAFNQTTQQLQCTDCDMFHFYIRNCGNLSRIEGYLTGTRTKPYVIINFYRNYFLHP	307

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun8g01518	307	Pfam	Wall-associated receptor kinase galacturonan-binding	37	100	IPR025287	GO:0030247
	Viun8g01518	307	PANTHER	OS01G0690200 PROTEIN	20	267	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun8g01518	Viun-Chr8	25144616	25146579	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun8g01518	31	263	C3H Transcription Factor Family	AT2G46495	27.273	4.38e-10	58.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun8g01518	-		-	vun:114195038	651.744