Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01514 ATGACTGCAGCCAGGGGAACTTTGGGCTACATTGCCCCTGAAGTTTTCTCTCGGAATTTTGGTAATGTTTCTTACAAGTCTGACATTTACAGCTATGGAATGTTGCTGTTAGAGATGGTAGGAGGAAGAAAGAATACAAATGTGTCAGTTGAGGACAGTTTCCAAGTTCTGTACCCAGAATGGATCCATAACTTGGTGGAAGGAAAAGATGTGGAAATTAGCGTTGAGGATGAGGGAGATACTAAAATTGCCAAGAAACTTGCCATTGTAGGACTTTGGTGCATTCAGTGGAACCCAGCGGATCGTCCTTCCATGAAAACTGTGGTACAAATGCTTGAAGGGGATGGATATGAGTTAGTAGCACCCCCTTCCCCTTTGCATATTTCTGGTTCTTCTACAACAAATACCATAGTTCCAGCCAGACGTCAAAATTTTGAATTGGAGGTTATTCATGAAATAGAAGAAAACAGTGTCGATCACTTTTAG 486 0.4177 MTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNVSVEDSFQVLYPEWIHNLVEGKDVEISVEDEGDTKIAKKLAIVGLWCIQWNPADRPSMKTVVQMLEGDGYELVAPPSPLHISGSSTTNTIVPARRQNFELEVIHEIEENSVDHF 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01514 161 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01514 161 SUPERFAMILY Protein kinase-like (PK-like) 2 135 IPR011009 -
Viun8g01514 161 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
Viun8g01514 161 Pfam Protein kinase domain 2 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01514 161 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 131 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01514 Viun-Chr8 25057425 25057910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01514 1 126 Receptor kinase-like Gene Family AT4G18250 50.000 4.45e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun8g01514 Pkinase 1.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01514 - - var:108338466 314.694