Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01513 ATGAGTGTCTTGCGCTTACCTTCTTGCTCTCGCTGTCCACAATCAGTGGTTGTCTTTATGGCTTTCATTTTTGCTCTTTTCCACCAAACTTGCAGTGCCAAGCATCGCACACCATGTCCATCTTCTTCATGCGGCGAATTTCGCGACATAAAATATCCATTCCGACTGAAAGGCGACCCTCGCGGTTGCGGCCTCCCCAACTACGAACTTGATTGCGTGAATAACAGGACAGTGCTTACTCTGTTTTCAGGAAAATACTATGTGAAGGAAATCGATTACAGTAGGTACGAAATCCGGCTGAGTGATGCGGGTGTTGTGGAGGACACTTCTTGCTCTTTTCCTCGCCATTTCTTATCCACACAAAATTTCAGTATTTTTGATACTCATCCGCTGACTACTTCGTTTGTGGAGGAATATCTTTATGAGCCTCCAAAAGTAGTGTTTCTAAACTGCAGCCACCGAGTGATTGATGATCCTCGATATGTGGAAGTGAAATCCGGCGGTTGTGATTCCGGTGGTGGCGTTATCTACGCCGTTCTGGATCGCAATGAGGCTGGTGCTCCGGAATTTACAGTGATGGACGTGAAGGCCGGGTGCAGATTAAAGGTTGCTACCTTCACAAACTGGACACATGACAGGAAGGTTTCCTATGCTGATATCCTCAGATCTCTGGAAGAAGGATTTTGGTTGAGTTGGTTACCACTTGTTTGTAGGGATCACTGTGGAAATGGTGTGTATTGCGCCCTCAATAAAACCACACAACAAATTCAATGCAGTTTTTGTCAAATCTTCAACCAGGATACCCTCAATTGTGGAATTCTATCGCGGATTCGTGGATACACTACTGGTTTCTTTAAAAGCATCATAAAAGGATTTGTCAATAGGATAAAAACTGTAAATCGATCATTGTCGGTCTGGAATGATGCAGGAGAATTCATAGGTCAAGATATTATACCAATACTAATAGCAACTAGGTATTTATTTGGACTCTCACTTTTGCTAGTGCTATTCATCTATAAATGGCGACGAAGACATTTTTCAGTGTATGAAAACATTGAAAACTTTTTGTTAGACAACTATATAAATCCCATTAGATACAAGTACAAAGAAGTCAAGAAAATGACTAAAGGTTTCAAAGTGAAATTAGGAGAAGGAGGTTTTGGTTTTGTTTACAAAGGAAAGCTTCAAAGTGGATTAGATGTAGCAGTAAAGATGTTGAGTAAATCCAAAGATAATGGACAAGATTTTGTTAATGAAGTAGCTACTATTGGAAGAATACATCATGTGAATGTAGTACGTCTTATTGGATATTGTGTCGAAGGAAAAAGGAGTGGTCTAATTTATGAATATATGCCTAATGGGTCATTGGATAAATACATTTTTTCTAAAGAAGGAAGTATTCATCTAAGTTATGAGAAAATTTATAAAATATCCCTTGGAATTGCTCATGGCATAGCATATCTTCATCGAGGTTGTGATGTGCAAATTTTACATTTTGATATAAAGCCTCATAATATTCTTTTAGACAACAGTTTTACTCCAAAGGTTTCAGATTTCGGACTTGCAAAGTTGTATCCTACAAAAGATGGATCTATAATTTTGACTGCAATAAAAGGAACATTGGGTTACATGGCTCCAGAATTATTCTACAAAAATGTAGGTGGAGTTTCTTATAAAGCCGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAGTAGGAGGAAAAACTCAGATCCTCGTGCAGAACATTCAAGTCAACAGTATTTTCCCTTTTGGATCCATGATCAATTTAAAGAAGAGAAAGATATTGATATGGAAGGTGCTTCAGAAATGGATAAGAATCTTATAAGGAAAATGTTCATAGTTGCACTTTGGTGTGTACAATTTAAGCCATGTGATCGTCCAACAATGAGCAAGGTTGTAGAGATGCTTGAAGGAAAAGTTGAAAATCTTGAAATTCCTCCAAAACCTTATTTCTATCCTCATGAAATGTTAGAACATGATGGTACAATCAACTCTAACGAAATATCCTGGAGTGATTCAACTACTTATAATGTGAATGTTGATGAAAACATGTCTAATCACTCTTCTTTGGAATAA 2106 0.3789 MSVLRLPSCSRCPQSVVVFMAFIFALFHQTCSAKHRTPCPSSSCGEFRDIKYPFRLKGDPRGCGLPNYELDCVNNRTVLTLFSGKYYVKEIDYSRYEIRLSDAGVVEDTSCSFPRHFLSTQNFSIFDTHPLTTSFVEEYLYEPPKVVFLNCSHRVIDDPRYVEVKSGGCDSGGGVIYAVLDRNEAGAPEFTVMDVKAGCRLKVATFTNWTHDRKVSYADILRSLEEGFWLSWLPLVCRDHCGNGVYCALNKTTQQIQCSFCQIFNQDTLNCGILSRIRGYTTGFFKSIIKGFVNRIKTVNRSLSVWNDAGEFIGQDIIPILIATRYLFGLSLLLVLFIYKWRRRHFSVYENIENFLLDNYINPIRYKYKEVKKMTKGFKVKLGEGGFGFVYKGKLQSGLDVAVKMLSKSKDNGQDFVNEVATIGRIHHVNVVRLIGYCVEGKRSGLIYEYMPNGSLDKYIFSKEGSIHLSYEKIYKISLGIAHGIAYLHRGCDVQILHFDIKPHNILLDNSFTPKVSDFGLAKLYPTKDGSIILTAIKGTLGYMAPELFYKNVGGVSYKADVYSFGMLLMEMASRRKNSDPRAEHSSQQYFPFWIHDQFKEEKDIDMEGASEMDKNLIRKMFIVALWCVQFKPCDRPTMSKVVEMLEGKVENLEIPPKPYFYPHEMLEHDGTINSNEISWSDSTTYNVNVDENMSNHSSLE 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01513 701 Pfam Wall-associated receptor kinase galacturonan-binding 39 102 IPR025287 GO:0030247
Viun8g01513 701 FunFam PR5-like receptor kinase 451 658 - -
Viun8g01513 701 PANTHER RUST RESISTANCE KINASE LR10-RELATED 349 668 IPR045874 GO:0004672
Viun8g01513 701 SUPERFAMILY Protein kinase-like (PK-like) 361 647 IPR011009 -
Viun8g01513 701 FunFam serine/threonine-protein kinase PBS1-like 349 450 - -
Viun8g01513 701 Gene3D Phosphorylase Kinase; domain 1 354 450 - -
Viun8g01513 701 ProSiteProfiles Protein kinase domain profile. 376 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01513 701 SMART serkin_6 376 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01513 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Viun8g01513 701 Pfam Protein kinase domain 380 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01513 701 Gene3D Transferase(Phosphotransferase) domain 1 451 655 - -
Viun8g01513 701 ProSitePatterns Protein kinases ATP-binding region signature. 382 404 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01513 Viun-Chr8 25048225 25053967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01513 16 662 Receptor kinase-like Gene Family AT5G38260 31.963 9.66e-103 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun8g01513 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01513 - - gmx:100170745 870.922