Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01463 ATGGCAGCAACGATGGATTTCTACAACGGACAACCTCAAGTTCAGTCGGATCCATTCAGAGGTGAGCTGATGGAAGTTCTAGAACCTTTTATGAAAAGTCCTTCCTCAACTCCCTCCTTATCTTCAGATTCAGCTTTACCTTCAACTTCCACTTCTACTTCATATTCCTACTCTCCTTCCCCTCTCTCATTCCCTCCACACCCTAATTTCTTCTATTCAGACCCTTCCTCCTCCTACCTGTTCCAAACCCAAACCCTAATAGGCTTTGAACAACAACCCGCTTCTGTTCTCGGGCTCAACCACCTAAGCCCGTTTCAGGTTTCTCAGATCCAGGCTCAGATGCAGGCTCAGAGCCAGACCTCCCTCTCCCTCAACTTCCTGGGCCCCAAGCCCGTGGCAATGAAGCATGTGGGTGGGCCTCCCAAGCCCCCCAAGCTGTACCGCGGGGTGAGGCAGAGGCATTGGGGAAAGTGGGTGGCGGAGATCAGGCTCCCCAAGAACCGAACCAGGCTCTGGCTCGGAACCTTCGACACTGCCGAGGAAGCAGCTTTGGCGTACGACAAAGCCGCGTACAGACTCCGAGGCGACTTCGCCAGGCTCAACTTCCCGAACCTCAAGGGCTCTTGCCTCGGCGAGTACAAGCCTCTGCAGTCCGCCGTGGACGCTAAGCTCGACGCCATTTGTCAGAGCCTGGCCGAAATGCCGAAGCAGGGTAAGACGGAGAAGGGTGGCAGGTCATCATCATCGAAGAAGTCAAAGGCAGCTCCAAAGGAGGCTCGGAATCCGAACCAGGATGCCAACCCGAACCTTGCTTGCAAGGCCGAGCCTGAACTTGAAGCCGAAGCCGAACCTGTTCAGTCTCCTGAAAGTGATGGCTCTGTGGATTCTTCTCTGCTCTCTGATCTCACCTTTGATGTCAGCGAGCCGCAATGGGAAGATGCTTCTGCACATTTTAATTTGCAGAAATTTCCTTCTTATGAGATCGATTGGGATTCTCTCTGA 1002 0.5349 MAATMDFYNGQPQVQSDPFRGELMEVLEPFMKSPSSTPSLSSDSALPSTSTSTSYSYSPSPLSFPPHPNFFYSDPSSSYLFQTQTLIGFEQQPASVLGLNHLSPFQVSQIQAQMQAQSQTSLSLNFLGPKPVAMKHVGGPPKPPKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYRLRGDFARLNFPNLKGSCLGEYKPLQSAVDAKLDAICQSLAEMPKQGKTEKGGRSSSSKKSKAAPKEARNPNQDANPNLACKAEPELEAEAEPVQSPESDGSVDSSLLSDLTFDVSEPQWEDASAHFNLQKFPSYEIDWDSL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01463 333 MobiDBLite consensus disorder prediction 235 301 - -
Viun8g01463 333 Gene3D AP2/ERF domain 146 204 IPR036955 GO:0003700|GO:0006355
Viun8g01463 333 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 333 - -
Viun8g01463 333 SMART rav1_2 146 209 IPR001471 GO:0003700|GO:0006355
Viun8g01463 333 CDD AP2 145 205 IPR001471 GO:0003700|GO:0006355
Viun8g01463 333 ProSiteProfiles AP2/ERF domain profile. 146 203 IPR001471 GO:0003700|GO:0006355
Viun8g01463 333 PRINTS Ethylene responsive element binding protein signature 147 158 IPR001471 GO:0003700|GO:0006355
Viun8g01463 333 PRINTS Ethylene responsive element binding protein signature 169 185 IPR001471 GO:0003700|GO:0006355
Viun8g01463 333 FunFam Ethylene-responsive transcription factor 2 145 204 - -
Viun8g01463 333 MobiDBLite consensus disorder prediction 1 58 - -
Viun8g01463 333 SUPERFAMILY DNA-binding domain 146 204 IPR016177 GO:0003677
Viun8g01463 333 Pfam AP2 domain 147 195 IPR001471 GO:0003700|GO:0006355
Viun8g01463 333 MobiDBLite consensus disorder prediction 238 258 - -
Viun8g01463 333 MobiDBLite consensus disorder prediction 32 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01463 Viun-Chr8 23887714 23889573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01463 1 333 AP2-EREBP Transcription Factor Family AT1G78080 47.091 1.47e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun8g01463 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01463 K09286 - gmx:100802961 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01463 8 23887714 23889573 Viun9g02555 9 34633457 34635327 PCT