Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01446 ATGTCCTCAATGGGTGGTTCAACTGATGAAAATCTTGAAACAAAAGAGCCACATGCGAGAAGTTTGTCATCTTCAAATGTCCAAGAACCATATGTACACAAGGTTGGAATTCCTCCGCGGCAAAACCTTTTCAGGGAATTCCAATCCACTGTAAAAGAAACATTTTTTGCAGATGATCCACTACGGCCCTTCAAGGATCAAACTAAGTCCCGGAAGCTCATCCTTGGCATTGAAGCCATTTTCCCCATACTTAGCTGGGGGAGAACCTATAATCTCACAAAACTTAGAGGGGATCTTATTGCTGGTCTAACTATTGCAAGTCTCTGCATTCCTCAGGACATTGGATATGCAAAGCTTGCAAATTTAGATCCAGAGTATGGATTATACTCCAGCTTTGTTCCACCACTGATTTATGCTGTCATGGGTAGTTCTCGTGACATTGCAATAGGACCAGTGGCAGTGGTTTCTCTCTTGTTGGGGACTTTACTTCAGAGTGAGATAGATCCTATTGCTAACCCAATAGACTATCGAAGACTTGCTTTTACTGCCACTTTCTTTGCGGGGATTACTCAAGCAACACTTGGGGTTTTAAGGTTGGGATTTCTGATTGATTTCCTATCTCATGCTGCAATTGTTGGCTTTATGGGAGGAGCTGCCATCACGATTGCCCTTCAACAGCTTAAGGGCTTCCTTGGGATTAAAAAATTCACAAAGAAAACTGATGTTATCTCTGTGATGTACTCAGTTCTGTCATCAGCCCATCATGGTTGGAATTGGCAAACTATAGTAATTGGAGCTGTTTTTCTGGCTTTTCTTCTGTTTGCCAAGTATATTGGAAAGAAGAACCCGAGATTCTTCTGGGTGCCAGCAATTGCCCCGTTGATATCTGTTATTCTCTCTACTCTTTTTGTATACTTAACACGTGCAGACAAGCATGGTGTTGCAATTGTAAAAAAGATAAAGAGTGGCATCAGTCCTTCATCTGTGAAGGAAATTTATTTTACTGGTGATTACCTTGGGAAAGGTTTCAGAATTGGCATCGTGGCTGGCATGATAGCATTGACTGAAGCTACAGCAATTGGAAGAACATTTGCTTCCATGAAGGACTATCAATTAGATGGAAACAAAGAAATGGTGGCATTAGGTGCTATGAATGTTGTTGGTTCATTCACTTCCTGTTATGTGGCAACTGGTTCTTTCTCTCGGTCAGCAGTAAACTACATGGCTGGCTGCGAAACTGCTGTATCTAATATTGTCATGTCTGTTGTTGTGTTCTTAACCTTGCAATTCCTCACACCTCTTTTCGAATACACTCCAAATGCCATTCTTGCTACAATCATTATTTCTGCTGTCATCAACCTTGTGGACTATAAAGCAGCGATTTTGATATGGAAGATTGATAAGTTTGACTTTGTTGCTTGCATGGGAGCATTTTTTGGGGTTGTTTTTGCATCAGTTGAAATAGGACTTTTAATTGCAGTCTCTATATCCTTTGCAAAGATCCTATTACAAGTTACTAGGCCACGAACTGCAATTCTGGGGAAGATCCCTAGGACTACTGTCTACAGAAACATCCAACAATACCCTGAAGCCACAAGAGTTCCTGGTTTACTCATCATCAGAGTTGATTCTGCAATATATTTTTCTAATTCCAACTATGTTAAAGAAAGGATATTAAGATGGCTGATGGATGAGGAAGAACAAGTGAAAGTAGACTACCAAACAAGAATCCAATTTTTGATAGTAGAGATGTCACCTGTCACAGACATAGACACAAGCGGCATCCATGCACTTGAAGAGTTATTTAGAAGTCTTCAGAAAAGAGATGTTCAGCTTGTTCTGGCAAATCCTGGGCCAATAGTAATAGACAAGCTCCACACATCAAATTTTGCGGCTTTGCTTGGTGAAGACAAGATCTTCCTCACTGTTGCAGAGGCTGTTGCATACTGTTCTCCAAAGTTGGCTGAGGAACCTTGA 1977 0.4092 MSSMGGSTDENLETKEPHARSLSSSNVQEPYVHKVGIPPRQNLFREFQSTVKETFFADDPLRPFKDQTKSRKLILGIEAIFPILSWGRTYNLTKLRGDLIAGLTIASLCIPQDIGYAKLANLDPEYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQSEIDPIANPIDYRRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDVISVMYSVLSSAHHGWNWQTIVIGAVFLAFLLFAKYIGKKNPRFFWVPAIAPLISVILSTLFVYLTRADKHGVAIVKKIKSGISPSSVKEIYFTGDYLGKGFRIGIVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGAMNVVGSFTSCYVATGSFSRSAVNYMAGCETAVSNIVMSVVVFLTLQFLTPLFEYTPNAILATIIISAVINLVDYKAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATRVPGLLIIRVDSAIYFSNSNYVKERILRWLMDEEEQVKVDYQTRIQFLIVEMSPVTDIDTSGIHALEELFRSLQKRDVQLVLANPGPIVIDKLHTSNFAALLGEDKIFLTVAEAVAYCSPKLAEEP 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01446 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Viun8g01446 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Viun8g01446 658 Gene3D STAS domain 507 654 IPR036513 -
Viun8g01446 658 MobiDBLite consensus disorder prediction 1 27 - -
Viun8g01446 658 NCBIfam sulfate permease 82 646 IPR001902 GO:0016020|GO:0055085
Viun8g01446 658 PANTHER SULFATE TRANSPORTER 41 651 IPR001902 GO:0016020|GO:0055085
Viun8g01446 658 FunFam Sulfate transporter 31 507 653 - -
Viun8g01446 658 Pfam STAS domain 528 646 IPR002645 -
Viun8g01446 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Viun8g01446 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
Viun8g01446 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01446 Viun-Chr8 23524242 23529948 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01446 1 657 Inorganic Solute Cotransporters AT1G22150 76.408 0.0 1001
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01446 K17470 - gmx:100797668 1204.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01446 8 23524242 23529948 Viun9g02534 9 34473716 34480144 PCT