Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01434 ATGAAGAAGGTCACAACAATTTTTTCAATCTTTTTGATCGCGCTACTTTGTTTGCACGAACTCGTCCACGTATCTTCGTCATCATTCTTATACGCACGGCAGGTCTATGAGGAATCTTCTGGTGAAAGGAAACTTGAACAGGAACAGGGACAAGAACATGTTCAAGAATTGCATTGCTCCAGGGAGAGAAGTAGGGCAGCTCGGAAAGTGATAGAGGAGTATTTGATGCCATTTGTGGAACGAGAAAACTACCGGCTTTCAACTAAATGCACACTTCACCCTGAAAATGATATATTTAGCGATCAGGAAGAGCATAAAATTTTCATAGATAGACATGAATGGCAGTGTGGATATTGTAAGAAAAGCTTTCGGGAAGAGAAATTTCTTGATCAGCATTTTGATAAAAGACACTACAATCTTCTGAATGTGAGTCATGGTAAATGCTTGGCTGATTTATGTGGTGCGATGCATTGTGATGCTGTGATGAATTTCAGATCCCCCAGAAGCAAGTGTAATCTGGCAGCTGCTGCAAGAAATCGTCATCTATGTGAGAGTCTTGCTGACAATTGTTTTCCTACAAGTGATGGTCCAGCAGCAGGACGCCTTCATGAATTGTTTCTGCACCAATTTTGTGATGCTCACACTTGCTCAGGGAAACATAAACCCTTCTCTCGAGGAGGCAAGGATCAAAGTAGTTTCTTCCGTCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATTTGATACAAAGTGATGTGAAGAATCGAACCCAAGAGCTTCGTCGCATTTCAAAAGCTGGATGGAAAACAAAACCATCATGA 843 0.4152 MKKVTTIFSIFLIALLCLHELVHVSSSSFLYARQVYEESSGERKLEQEQGQEHVQELHCSRERSRAARKVIEEYLMPFVERENYRLSTKCTLHPENDIFSDQEEHKIFIDRHEWQCGYCKKSFREEKFLDQHFDKRHYNLLNVSHGKCLADLCGAMHCDAVMNFRSPRSKCNLAAAARNRHLCESLADNCFPTSDGPAAGRLHELFLHQFCDAHTCSGKHKPFSRGGKDQSSFFRLAAGALILVLLPVFYLFLYLIQSDVKNRTQELRRISKAGWKTKPS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01434 280 ProSitePatterns Zinc finger C2H2 type domain signature. 116 137 IPR013087 -
Viun8g01434 280 ProSiteProfiles Zinc finger C2H2 type domain profile. 114 137 IPR013087 -
Viun8g01434 280 PANTHER ZINC FINGER PROTEIN-RELATED 8 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01434 Viun-Chr8 23257348 23261811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01434 34 280 C2H2 Transcription Factor Family AT5G63280 59.514 1.01e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun8g01434 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01434 - - gmx:100780668 488.034