Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01394 ATGGCGGCTTCCGTTCACAACCTTCAATTCGGCACTCATATGAACGGCGTCGTTCGCAGTTGCGGGCAGGATCTGAAGCCCCCTCTGCCGTTGGATTTCGATCTGGACTCCTCCAGCAGCGACGAGGATGAAAACGACGACGCTTCGTACCTGAAAGAGTACATACGAAAAGTGAACGCGGAAACGGAGGCGTCAGTTATGGACCCGCGAGACGAGGGAACGGCGGATCAGTGGGTCGCACGGAACGCCTCCATGGTCCGCCTCACAGGGAAGCACCCCTTCAACGCGGAATCCCCTTTGCCGCGTCTCATGCACCACGGCTTCATCACCCCAGTCCCGCTCCACTACGTCCGCAACCACGGTCCAGTTCCCAAGGCCAAGTGGGAAGACTGGACCGTTGAAATAACCGGTCTAGTAAAGCGTCCAACCCGGTTCACCATGGACCGCCTCGTGCGCGAGTTCCCCCACCGCGAGTTCCCCGTCACCCTCGTCTGCGCCGGGAACCGCCGCAAGGAGCAGAACATGGTCAAGAAGACCATCGGCTTCAACTGGGGCTCAGCCGGCACCTCCACCTCCGTGTGGCGCGGCGTGCCGCTGCGCCACGTGCTGAAACGCTGTGGGATCCTTACACGTTCGAAGGGCGCGCTTCACGTGTGCTTCGAGGGCGCCGAGAATCTCCCCGGAGGCGGCGGATCCAAGTACGGAACGAGCATCTCGAGGGAGATGGCCATGGACCCCTCGCGCGACATCATCCTTGCGTACATGCAAAACGGCGAGCCTCTGGCACCGGATCACGGCTTCCCCGTTCGCATGATTATTCCCGGGTTTATCGGTGGCAGAATGGTGAAGTGGCTCAAACGCATTGTCGTTACTGAACTTGAGTGCGACAATCATTATCATTACAAGGATAACCGAGTGCTCCCTTCCCATGTTGATCCAGAACTTGCCAATGAAGAAGGTTGGTGGTACAGACCAGAGTACATAATCAACGAGTTGAATATAAACTCAGTGATAACGACTCCGTGTCACGATGAGATTTTGCCCATCAACTCATGGACAACGCAGAGGCCATACGTAGTCAGAGGCTACGCTTATTCCGGTGGTGGGAGGAAAGTGACACGTGTGGAGGTAACACTGGACGGTGGAGAAACGTGGCACGTGTGCACACTGGATCATCCTGAGAAACCTAACAAATATGGAAAGTATTGGTGCTGGTGCTTCTGGTCTTTGGAGGTGGAGGTGTTGGACCTGCTGGGGACCAAAGAGATTGCAGTTCGAGCTTGGGATGAAGGTCTCAACACGCAGCCAGAAAACCTAATTTGGAATCTTATGGGCATGATGAACAACTGTTGGTTCAGAGTGAAAACAAATGTGTGCAAGCCCCATAAGGGTGAGATTGGCATAGTGTTTGAACACCCAACCCAACCAGGGAACCAACCTGGTGGTTGGATGGCCAAGGAAAAGCACTTAGAGACATCACAAGAACCCAAACCAAGCCTCAAAAAGAGTGTCTCTACGCCATTCATGAACACTTCTTCAAAAATGTTCTCCATCTCCGAAGTTAAAAGACATAGCAGCCCTGACTCCGCTTGGATCATCGTCCACGGTCACGTCTACGACTGCACTCGCTTCCTCAAAGATCACCCTGGTGGCACCGACAGCATCCTCATCAATGCCGGCACCGACTGCACCGAAGAGTTTGACGCCATCCACTCTGACAAAGCAAAGAAGATGCTCGAAGATTATCGAATTGGCGAACTCATCACTACAGGTTACACCTCAGACTCATCGCCGAACAACTCCGTGCATGGAAATTCCGAATTCACCCATTTGGCTCCTATCAATGAAATCGCCTCAAAACCACCACTACCACCACGCAGTGTGGCTCTCAACCCACGTGAGAAAATCCCATGCAAACTCGTGTCAAAGACCTCCATTTCGCACGACGTGAGGCTTTTCCGTTTCGCACTGCCTTCAGAGAACCAACTCCTAGGTTTACCGGTGGGTAAGCACATTTTCCTGTGCGCCACCATTGATGGAAAGCTATGCATGCGAGCCTACACTCCAACAAGTGGCGTGGACGAAGTGGGGTTCTTCGAGTTGCTCATCAAGGTTTACTTCAAAGGCGTGCACCCCAAGTTCCCGAACGGAGGACTAATGTCACAGCATTTGGAGTCTCTCTCCATTGGGTCCATGTTGGACGTGAAGGGTCCTCTGGGTCACATAGAGTACACCGGAAGAGGCAACTTCACGGTTCATGGGAAACCTAGATTCGCAAAGAGGTTAGCCATGCTAGCTGGTGGAACCGGGATCACACCAATCTACCAAGTGGCGCAAGCGATTCTGAAAGACCCAGAGGACCTCACAGAAATGCATGTGGTGTATGCAAACCGCACAGAGGAGGATATTCTTCTGAGAGAGGAGTTGGATGCATGGGCGAAGGAACACAGCGAGCGGTTCAAGGTGTGGTACGTTGTGGAAACCGCGAGGGAAGGGTGGGAATACAGTGTGGGGTTCATCACAGAAACTATCATGAGGGAGCATCTTCCAGAAGCTTCAAGGGATTCCTTGGCTTTGACGTGTGGACCACCACCCATGATTCAGTTCGCGGTGCAGCCCAATTTGGAGAAGATGGGGTACGATATCAAGAACGATTTGCTCGTGTTTTAG 2670 0.5326 MAASVHNLQFGTHMNGVVRSCGQDLKPPLPLDFDLDSSSSDEDENDDASYLKEYIRKVNAETEASVMDPRDEGTADQWVARNASMVRLTGKHPFNAESPLPRLMHHGFITPVPLHYVRNHGPVPKAKWEDWTVEITGLVKRPTRFTMDRLVREFPHREFPVTLVCAGNRRKEQNMVKKTIGFNWGSAGTSTSVWRGVPLRHVLKRCGILTRSKGALHVCFEGAENLPGGGGSKYGTSISREMAMDPSRDIILAYMQNGEPLAPDHGFPVRMIIPGFIGGRMVKWLKRIVVTELECDNHYHYKDNRVLPSHVDPELANEEGWWYRPEYIINELNINSVITTPCHDEILPINSWTTQRPYVVRGYAYSGGGRKVTRVEVTLDGGETWHVCTLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGTKEIAVRAWDEGLNTQPENLIWNLMGMMNNCWFRVKTNVCKPHKGEIGIVFEHPTQPGNQPGGWMAKEKHLETSQEPKPSLKKSVSTPFMNTSSKMFSISEVKRHSSPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHSDKAKKMLEDYRIGELITTGYTSDSSPNNSVHGNSEFTHLAPINEIASKPPLPPRSVALNPREKIPCKLVSKTSISHDVRLFRFALPSENQLLGLPVGKHIFLCATIDGKLCMRAYTPTSGVDEVGFFELLIKVYFKGVHPKFPNGGLMSQHLESLSIGSMLDVKGPLGHIEYTGRGNFTVHGKPRFAKRLAMLAGGTGITPIYQVAQAILKDPEDLTEMHVVYANRTEEDILLREELDAWAKEHSERFKVWYVVETAREGWEYSVGFITETIMREHLPEASRDSLALTCGPPPMIQFAVQPNLEKMGYDIKNDLLVF 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01394 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 857 865 IPR001709 GO:0016491
Viun8g01394 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 685 692 IPR001709 GO:0016491
Viun8g01394 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 801 812 IPR001709 GO:0016491
Viun8g01394 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 789 798 IPR001709 GO:0016491
Viun8g01394 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 763 782 IPR001709 GO:0016491
Viun8g01394 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 833 849 IPR001709 GO:0016491
Viun8g01394 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 547 557 IPR001709 GO:0016491
Viun8g01394 889 PRINTS Cytochrome B5 reductase signature 664 675 - -
Viun8g01394 889 PRINTS Cytochrome B5 reductase signature 763 782 - -
Viun8g01394 889 PRINTS Cytochrome B5 reductase signature 801 812 - -
Viun8g01394 889 PRINTS Cytochrome B5 reductase signature 685 692 - -
Viun8g01394 889 PRINTS Cytochrome B5 reductase signature 730 744 - -
Viun8g01394 889 PRINTS Cytochrome B5 reductase signature 857 865 - -
Viun8g01394 889 FunFam NADH-cytochrome b5 reductase 624 739 - -
Viun8g01394 889 SUPERFAMILY Riboflavin synthase domain-like 626 745 IPR017938 -
Viun8g01394 889 PANTHER SULFITE REDUCTASE 53 461 - -
Viun8g01394 889 PRINTS Cytochrome B5 signature 538 548 IPR001199 -
Viun8g01394 889 PRINTS Cytochrome B5 signature 563 570 IPR001199 -
Viun8g01394 889 PRINTS Cytochrome B5 signature 548 562 IPR001199 -
Viun8g01394 889 PRINTS Cytochrome B5 signature 575 587 IPR001199 -
Viun8g01394 889 FunFam Nitrate reductase 509 590 - -
Viun8g01394 889 PIRSF Nitr_rd_NADH 10 888 IPR012137 GO:0006809|GO:0042128|GO:0050464
Viun8g01394 889 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 633 745 IPR017927 GO:0016491
Viun8g01394 889 FunFam Nitrate reductase 72 321 - -
Viun8g01394 889 Pfam Oxidoreductase FAD-binding domain 638 744 IPR008333 -
Viun8g01394 889 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 68 329 IPR036374 -
Viun8g01394 889 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 137 172 IPR022407 GO:0043546
Viun8g01394 889 FunFam Nitrate reductase 331 507 - -
Viun8g01394 889 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 544 551 IPR018506 GO:0020037
Viun8g01394 889 FunFam Nitrate reductase [NADH] 740 889 - -
Viun8g01394 889 Pfam Oxidoreductase NAD-binding domain 764 871 IPR001433 GO:0016491
Viun8g01394 889 CDD cyt_b5_reduct_like 638 884 - -
Viun8g01394 889 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 511 592 IPR036400 -
Viun8g01394 889 Pfam Cytochrome b5-like Heme/Steroid binding domain 519 587 IPR001199 -
Viun8g01394 889 Gene3D - 740 889 IPR039261 -
Viun8g01394 889 SMART Cyt_b5_2 516 588 IPR001199 -
Viun8g01394 889 Gene3D - 509 590 IPR036400 -
Viun8g01394 889 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 513 588 IPR001199 -
Viun8g01394 889 Gene3D - 331 505 - -
Viun8g01394 889 Pfam Oxidoreductase molybdopterin binding domain 120 299 IPR000572 -
Viun8g01394 889 Gene3D Translation factors 626 739 - -
Viun8g01394 889 CDD eukary_NR_Moco 71 456 - -
Viun8g01394 889 Pfam Mo-co oxidoreductase dimerisation domain 327 458 IPR005066 GO:0016491|GO:0030151
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 278 291 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 172 184 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 245 261 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 187 202 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 329 341 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 86 100 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 426 438 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 161 172 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 374 386 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 401 411 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 262 275 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 108 124 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 439 452 IPR008335 GO:0016491
Viun8g01394 889 PRINTS Eukaryotic molybdopterin domain signature 360 374 IPR008335 GO:0016491
Viun8g01394 889 Gene3D - 70 320 IPR036374 -
Viun8g01394 889 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 733 883 IPR039261 -
Viun8g01394 889 SUPERFAMILY E set domains 331 458 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01394 Viun-Chr8 21907431 21913130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01394 626 880 NADPH P450 reductases AT5G17770 42.023 4.10e-55 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01394 K10534 - gmx:100813471 1666.36