Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01387 ATGCGGCATTCGATGGAAGAGAACCCTAACCTCTCTCTCACGCGCGATTCTTCCCCTTCCTCTCCGGAATTCTTCAAACAAGTCCAAGCTGCTCTCAAGCGCCACCGCCCTCTCGCCGTTAATGCCTCTTCAGCTTCAACGCAATTGCATACCTTGAGGCCACGGCGCTCCATGGTGGCGCACCGAAACATCGCGAACAAGTCCCAAGAGGAACATCCGTCGATTTCGGACACCTGCACCGGGGATGGTTGCAAGAACGAACCCTCTCTGCCGGTGGAATCTCATAGTGTTGGTGCGCACAAGAAGGTTCGTTTTTCAACTGAGAGTAACAATGCCACTTCACAGCCGCATGGTGCGGCGTCAATTGGATTCAGTCAACATGTGAAACACCACAATATGCAGCAGGCAGAGTCTGAGACTAGTTTGTTATCTGAGGGAGGCAAGAGTTCTCTGCTTCCAAGGAGAAGAATAGTTACTCAGGATCATCTCCAGCAATTCAAAAACTTTTTGAGTCAACCAGCTACACAATCTTCCGTAGTGGGATTGCCATGCCCTACAACTACATCAGTCCATTCAACTTCAGCTCCAATGCCGAATTCTTTAACTCATTGTGCTAATTCCTGTATGGATAGTGACTCACAAGTGGCTGCAGAACCTTATGATAACCTGAATGTCAATCCTCATTCTATAACACAAGGGGGTGCCAAATCACCATATGATTCTCTGAAAGACACCAATAGAATGTCAATTGATCAGGTGGCAAGTGCAGTTCAAGAATATAATTCACTAAATGATGCAAAGTTGACATTTAAGCACAGTGATCCATCTAAGGAGCAACAAGGATGTTTGCTAAAGGAAACTAGTAAATATACTTGTTGTAATGACATGTTAAATAACGGGGATGAGCCTGCAGCTGTTACCAACATAGTGCCTCAGGGTCTGACTTCATCTTCAGATACGAAGCTGGAATCTTCTAGGTTAGAAAAGCAAGAAAAAAATGCAAGTTGTAAAGGACCTTCAGTTGCTCGAAAGAGGACTTATGACCCTGAGTTGTTTTTTAAAGTCAATGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGAAGTGGTGGAAGCAGTGAGGTGCACAAAGTGATTTCATCAGACTGTACTATCTATGCACTTAAAAGAATAAAACTAAAGGGTCGTGATTATGCCACAGCATACAGCTTTTGTCAGGAGATTGAGTATCTAAATAGGCTGAAAGGAAAGAATAATATTATCCAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGTTTGAGGGAGTCATAAATGGCTCCTTCAGTAGTAAAGATGGTAGAGTCAAGGATGATGGGTACATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCATATGTTGTCTCAAAAGTGGAAGGAACTAGATGGGAACAACCAGACCATAGATGCGAATTGGCTTCGGTTTTATTGGCAGGCTGTCAACACAATTCATGAAGAACGTATTGTGCATTCTGACTTAAAGCCAGCTAACTTCCTCCTTGTCAAGGGTTCATTAAAACTGATTGATTTTGGAATAGCCAAAGCAATAATGAGTGATACAACAAACATCCAACGTGATTCACAGGTTGGTACTCTAAGTTACATGTCACCAGAAGCATTTATGTGTAATGAGAGTGATGCGAGTGGAAACATCATGAAGTGTGGTCGGCCATCAGATATCTGGTCCCTTGGCTGCATTCTTTATCAAATGGTATATGGGAGAACACCCTTTTCAGATTACAAGACATTTTGGGCCAAATTCAAAGTTATAACTGATCCAAATCACGAAATTATGTACGAACCAGTTTCAAATCCTTGGCTTCTGGATCTTATGAAAAAATGTCTAGCATGGGATCGCAATGAAAGGTGGAGAATTCCTCAGTTGCTCCAGCATCCTTTTCTAGTTCCACCAGTTCCATGTGATCAATCTTTGTTCCAAGATCAAACCTTTAAATTGCTGCAACTTATATCTGAAACTTGCAAAAATGACCCAGAAGCATCGCAGCTCTGTCTTCAACTTCAACAGGTGCTTGATAATCCCATAGAATTAACTAGTACTCATTCATTAAACTCCCTAGACCAACAGCGTAAATTGCTATCCCGAATATCAGAACTTTGTATTCAACTACAGAAACGCTTTCCAAATTCGGATGAAGAATAG 2205 0.4218 MRHSMEENPNLSLTRDSSPSSPEFFKQVQAALKRHRPLAVNASSASTQLHTLRPRRSMVAHRNIANKSQEEHPSISDTCTGDGCKNEPSLPVESHSVGAHKKVRFSTESNNATSQPHGAASIGFSQHVKHHNMQQAESETSLLSEGGKSSLLPRRRIVTQDHLQQFKNFLSQPATQSSVVGLPCPTTTSVHSTSAPMPNSLTHCANSCMDSDSQVAAEPYDNLNVNPHSITQGGAKSPYDSLKDTNRMSIDQVASAVQEYNSLNDAKLTFKHSDPSKEQQGCLLKETSKYTCCNDMLNNGDEPAAVTNIVPQGLTSSSDTKLESSRLEKQEKNASCKGPSVARKRTYDPELFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKRIKLKGRDYATAYSFCQEIEYLNRLKGKNNIIQLIDYEVTDKALFEGVINGSFSSKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGNNQTIDANWLRFYWQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDASGNIMKCGRPSDIWSLGCILYQMVYGRTPFSDYKTFWAKFKVITDPNHEIMYEPVSNPWLLDLMKKCLAWDRNERWRIPQLLQHPFLVPPVPCDQSLFQDQTFKLLQLISETCKNDPEASQLCLQLQQVLDNPIELTSTHSLNSLDQQRKLLSRISELCIQLQKRFPNSDEE 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01387 734 MobiDBLite consensus disorder prediction 128 148 - -
Viun8g01387 734 Gene3D Phosphorylase Kinase; domain 1 353 437 - -
Viun8g01387 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Viun8g01387 734 FunFam serine/threonine-protein kinase mph1 isoform X1 474 652 - -
Viun8g01387 734 MobiDBLite consensus disorder prediction 7 22 - -
Viun8g01387 734 MobiDBLite consensus disorder prediction 69 83 - -
Viun8g01387 734 FunFam serine/threonine-protein kinase mph1 isoform X2 353 440 - -
Viun8g01387 734 Pfam Protein kinase domain 360 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01387 734 Gene3D Transferase(Phosphotransferase) domain 1 479 652 - -
Viun8g01387 734 SMART serkin_6 360 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01387 734 PANTHER MIXED LINEAGE PROTEIN KINASE 58 681 - -
Viun8g01387 734 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Viun8g01387 734 MobiDBLite consensus disorder prediction 64 98 - -
Viun8g01387 734 MobiDBLite consensus disorder prediction 128 147 - -
Viun8g01387 734 MobiDBLite consensus disorder prediction 315 340 - -
Viun8g01387 734 MobiDBLite consensus disorder prediction 1 22 - -
Viun8g01387 734 ProSiteProfiles Protein kinase domain profile. 360 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01387 734 SUPERFAMILY Protein kinase-like (PK-like) 354 669 IPR011009 -
Viun8g01387 734 CDD PKc_Mps1 358 649 IPR027084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01387 Viun-Chr8 21611260 21622764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01387 326 650 MAP Kinase Kinase Kinase AT4G08470 29.155 1.45e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Viun8g01387 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01387 K08866 - gmx:100816674 1181.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01387 8 21611260 21622764 Viun8g01387 8 21611260 21622764 ECH