Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01369 ATGGAGAGAGCGTTGCAGTGGATTCTGGTTGTAGCAGTATGTGCTTCATCCACCATTAATTCTGCAGGAATCGATGAAACTCCTCATAGAAAGCTTGCCAATGTTGATTATTCAGATGTGATAAGCATTGATTGCGGAGTAAAGGAGGGCTACATTGACGAGACCCGCATACAGTACGAAGACGATGATATTGAATTGGGTGAAACTCACACGATTTCCGAAAACTCCTTTGAAACCCAACCTCAAATTAATAAACAGCTTATGTCTCTGAGAAGCTTCCCAGAAGGGAAGAGGAATTGCTATAGCTTGAAACCCAAAGAGGGGAAGAACAAGAGATACATTGTGAGAGGTTACTTTGCGTATGGAAACTATGACAACAAAAGTATGCCTCCAACGTTTGATTTGTACATTGATGTCACTGTCTTCACCTCCATACGTTTCACTGTGGCTAGTAGCACTCGTCGAGTTGAGGCTATTTATAGCAGCTTAGCGGACACCATTGATTTGTGCATGGTGAATATTGAGCAAGGAGTACCTTTCATTTCACTGTTGGAGTTGTGGCCTCTGGGAAGTGCTAATGTTTATCAAGATTTGTTGAATTTACAGACGCTGGATCTCCTCACCAGAGTCACACTTGGAGTCTCTTCTGCACACGGCCAATTGCTCAGGTATATGGATGACGAATATGGTAGGTCTTGGCTTGCAAGAGCGGTAACACGTAATGAGAAAGAAATGAAAACAGTATTAGGTATTGATTTGGATACGTTGAATGATCCTTACAAGTTGCCGACAGAAGTGTTGAACACTGCAGTGAGTGCATTGAGGTTGTCTGATTCGGTGAATATATGGAGGAATTACACAGACAGGAGTGTGGAATATAAAGTATATCTTCATTTTTTTGACTTTGAGGAAAGGGTAGATAGTAGTGAGAAAAGGATAATGAATGTTGTTGTTAATGGGTTTGGAGAAGGTGTTCATGATAATGTCACCGAAAACGTTAGTATTTCGTACAAGGAGCCCCTTACACTACAACTTACTGTAGAACAAGGAATGGGCATTAACAACATTTTCATTAAAGCCACCCCTGACTCTCAGTTACCTGCCATGCTTAATGCTTATGAGATTTACAGAGTGATTCCTCAGTCTGTTTCAGCCACACATCAAGATGATGTTGATGCGATCAAACGCATCAAAGATATCTATAAGATCTCCAGAATGAAGTGGCAAGGAGACCCCTGCGGACCAACAGGTTTTACATGGGACGGTCTGACTTGTAATGCTGGGAATCCTCCAAGAATCATCTCTCTAAACTTGAGTTCAAGTAAATTATCAGGCAACATAGATGTGTCATTCTCCAACCTTGCAAATTTAGAAATTTTGGATCTGTCAAACAATCAATTGGTGGGAGAGGTGCCAGAATTCTTTGCCAAGTTATCACAGTTGAAGATACTTAATTTGTCCAGAAATAGCCTCACGGGTTCCATTCCTGATGCCCTCATAGCGAAGTCAGAGAGTAATTCTTTGCAATTGAGTTTGGACGGGAATACTGATATATGTGAGATAGGATCCTGTAAGAAGAAGAATATTGTTCCATTAGTTGCAACTATTGTAGCATCAATTGTTGTCTCTATAATAATAGTGGGCATAGTTATGATTTGGAGATCACTCAGACGAAATAAAGGAGGGATATCTTCAACTTCAAAAAAAGGTCAACTAAAATTAAAAAATCAAACATTTTCTTACTCGGAGGTTCATGATATTACCAACGGTTTCGAAACAATGATTGGAAAAGGTGGATTTGGTGAAGTTTACCTTGGCACTTTGCAAAGTGATGAACGAGTTGCCGTAAAGAAACTCTCTCTCTCATCAAATCAAGGTTATAAGGAGTTTAAGTCAGAGGCAAAGTTTCTAACGCTTGTTCATCATAGAAATGTGGTTTTTCTTGTGGGATATTGTGATGAAGGTGATGCTAAAGCACTTATTTACGAATATCTTTCAAAAGGAAACCTCCAAGAACAATTGTCAGGAAAAAGCTCAAGTGTCTTGGGATGGAAAGAGAGAGTTCAAATTGCGTTACATGCAGCAAGTGGATTGGATTATCTGCATAATGGATGTAAGCCACCTATAATTCACAGAGATTTGAAAGGTTCCAACATCCTACTAGATGAAAATATGCATGCCAAGATTTCAGACTTTGGATTGTCTAGAACTTTTGCAAATGACAATGACACTCATGTCTTAACTAATTACCCAGGTGGCACACCAGGTTACCTTGATCCTGAGTTTCACTCCTCGGGGACTCTCAATAAAAGGAGTGATGTTTACAGTTTTGGGGTAGTTTTATTAGAGTTAATTACAGGTCAACCAGCAATAAGAGGAACTCCTGAGAAACCTAGCCACATACATTCTTGGGTTAAGAAAAAACTTGAAGCTGGAGATATTGAAGCAATAGTTGATCCAAGATTAGAAGGAAATTTCCATGTTGCTTCAGCTTGGAAGTTTTTGGACATAGCCATGTCATGCCTTCCTGATATTGCCATCCAAAGGCCTGACATAAGCCATGTAACCTCAGAACTGAAGGATTGTTTGTCTTTGGAAGCATCCCTTCAAAGGACTGGAAGCAACAACAGGGATTCGTTCCTCATGGATTCTGTGCTCATTCATTTCAATGAATCCGATATATTTCCAAATCCTAGGTAG 2700 0.3989 MERALQWILVVAVCASSTINSAGIDETPHRKLANVDYSDVISIDCGVKEGYIDETRIQYEDDDIELGETHTISENSFETQPQINKQLMSLRSFPEGKRNCYSLKPKEGKNKRYIVRGYFAYGNYDNKSMPPTFDLYIDVTVFTSIRFTVASSTRRVEAIYSSLADTIDLCMVNIEQGVPFISLLELWPLGSANVYQDLLNLQTLDLLTRVTLGVSSAHGQLLRYMDDEYGRSWLARAVTRNEKEMKTVLGIDLDTLNDPYKLPTEVLNTAVSALRLSDSVNIWRNYTDRSVEYKVYLHFFDFEERVDSSEKRIMNVVVNGFGEGVHDNVTENVSISYKEPLTLQLTVEQGMGINNIFIKATPDSQLPAMLNAYEIYRVIPQSVSATHQDDVDAIKRIKDIYKISRMKWQGDPCGPTGFTWDGLTCNAGNPPRIISLNLSSSKLSGNIDVSFSNLANLEILDLSNNQLVGEVPEFFAKLSQLKILNLSRNSLTGSIPDALIAKSESNSLQLSLDGNTDICEIGSCKKKNIVPLVATIVASIVVSIIIVGIVMIWRSLRRNKGGISSTSKKGQLKLKNQTFSYSEVHDITNGFETMIGKGGFGEVYLGTLQSDERVAVKKLSLSSNQGYKEFKSEAKFLTLVHHRNVVFLVGYCDEGDAKALIYEYLSKGNLQEQLSGKSSSVLGWKERVQIALHAASGLDYLHNGCKPPIIHRDLKGSNILLDENMHAKISDFGLSRTFANDNDTHVLTNYPGGTPGYLDPEFHSSGTLNKRSDVYSFGVVLLELITGQPAIRGTPEKPSHIHSWVKKKLEAGDIEAIVDPRLEGNFHVASAWKFLDIAMSCLPDIAIQRPDISHVTSELKDCLSLEASLQRTGSNNRDSFLMDSVLIHFNESDIFPNPR 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01369 899 Pfam Malectin-like domain 43 378 IPR024788 -
Viun8g01369 899 SMART serkin_6 589 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01369 899 Pfam Leucine Rich repeats (2 copies) 456 495 IPR025875 -
Viun8g01369 899 SUPERFAMILY Protein kinase-like (PK-like) 572 858 IPR011009 -
Viun8g01369 899 CDD STKc_IRAK 595 860 - -
Viun8g01369 899 ProSiteProfiles Protein kinase domain profile. 589 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01369 899 FunFam Leucine-rich repeat receptor-like kinase 389 521 - -
Viun8g01369 899 Gene3D Ribonuclease Inhibitor 394 519 IPR032675 -
Viun8g01369 899 SMART LRR_typ_2 454 477 IPR003591 -
Viun8g01369 899 SMART LRR_typ_2 478 502 IPR003591 -
Viun8g01369 899 FunFam serine/threonine-protein kinase PBS1-like 559 664 - -
Viun8g01369 899 Gene3D Phosphorylase Kinase; domain 1 571 664 - -
Viun8g01369 899 PRINTS Leucine-rich repeat signature 478 491 - -
Viun8g01369 899 PRINTS Leucine-rich repeat signature 457 470 - -
Viun8g01369 899 SUPERFAMILY L domain-like 416 502 - -
Viun8g01369 899 ProSitePatterns Protein kinases ATP-binding region signature. 595 618 IPR017441 GO:0005524
Viun8g01369 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 709 721 IPR008271 GO:0004672|GO:0006468
Viun8g01369 899 Pfam Protein tyrosine and serine/threonine kinase 592 794 IPR001245 GO:0004672|GO:0006468
Viun8g01369 899 Gene3D Transferase(Phosphotransferase) domain 1 665 883 - -
Viun8g01369 899 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 665 872 - -
Viun8g01369 899 PANTHER OS07G0107800 PROTEIN-RELATED 41 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01369 Viun-Chr8 21106750 21121175 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01369 36 899 Receptor kinase-like Gene Family AT2G19210 41.563 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun8g01369 Malectin_like 2.5e-69 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01369 - - pvu:PHAVU_008G164600g 972.615