Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01368 ATGGACAGAGAATTGCAATGGATCCTAGTTTTAGCAATTTGTGCTTCATCACTCATCAATATACTTGCTCAGAACCCTCAACTAACTACTTACCGGAACCTCGCCAATCTTGATTATTCAGGTGTTATAAGCATTGATTGTGGGGTAAACGAGGGCTACACTGACAAAACAACCAACTTACAGTACGAAGCAGATGATATCGAATTTGGTGAAATGAATAATACATTCTCAACTTACAACATAAGTCAAATTCATAAGCAGTTGAACACATTGAGAAGTTTCCCTTATGGGAAGAGAAATTGCTATACCTTAACACCCAAACAGGGAAAGAATAAGAAATACATAGTCAGGGCTTACTTTGCATATGGCAACTATGACAGCAAAAATAAAGCACCAGTTTTTGATCTGCATCTTGGAGTCAATTTCTTGAAGACAATAAACGCTTCTGAGGCTGCGGTAATTCGAATCGAAGCTGTTCATTTTGCCTCAACAGAAAGAATCGATTTTTGCCTTGTGAACATCGATCAAGGGGTGCCCTTCATCTCATTGTTGGAGCTATGGCCTTTGGACAATTCCATTTATCAAAGTTCCTCCACTTTGTTAACACTAGATCTCCTCACCAGACTTAACCTTGGTGCTTCTGAAGATAACTTCATCAGGTACACAGATGATATATACGGAAGGTCATGGGAAGTTCCGAACAATTATAACAAGCATTTAAAAACATCATCAGCTATTGATTTGGATAAACTTGATGATCTTTACAAACTGCCAGCAGAAGTTTTGAGTTCTGCAGTGGAGGGATTACATTCCAGTTCCTTGGAATTCACACTCAAATATGACACGGATTCTGAATATTGCGTTTATCTTCATTTTTTTGACTTTGAGGATCGGACCAATAAACAAAAACGAAGATTGAATATTGTTATTAATGGTTTTGACGATAATAATGTGACAGAATTTCTTACTCTTTCATACTGGAAGCCCTATAGCATAATTCTACCTATAAAACAAGGGATGGGGATTCAGAAGATATTGATTGAAGCCAACTCTGATTCTGACTTACCTCCAATGCTTAATGCTCTTGAGATTTACAGAGTACTGCCTCAGTCAGATTCTTCCACACAACAAGAAGATCTTGATGCAATCTGGCATATCAAAGATGTTTATAGGATCAGTAACATGAATTGGCAAGGAGACCCCTGTGGACCAAAGAATTTTACATGGGAAGGTGTGAAATGCAGCAATGGAGACACTCCAACAATCATTTCATTAAACTTGAGCTCAAGCAAGTTGTCAGGAGAAATAGATGCCTCATTCTCCAACCTCACATGTTTGGAGACTCTGGATTTGTCAAACAATGAATTGACAGGGGAGGTGCCAGAATTTTTTGCAAAACTGCCACAATTGCATTTTCTTAACTTGTCCATGAATATGCTCACAGGTTCAGTTCCGGAGAGTCTAAAGGCAAAGTCATCTAACAACTCTTTGCAATTCAGTTTCGATGGAAATCTCCGTCCTTATCAGACAGAGTCAAGCAAGAGCAACCACAAGAAGTTTCTTATTCCATTAGTGGCCTCTATAACAGCATTTGTTGCAGTGGTCCTCACAATATCTACCATAGTTATGGTGATCCGGAGACTTAGAAAAAAGGGAAAAGTGATTTCTACAATTTCTGTCAAAGATGACCTACTGAAATCAGCAAATCAAGCATTTTCTTACTCAGAAATTCTTAGAATCACTAATGATTTCTCAACAATGATTGGGAAAGGTGGATTTGGTAAGGTATACCTAGGTACTTTAGAGTGTGGCAAAAGAGTTGCTGTGAAGATACTTTCTTCACCATCAGCACAAGGGTATAAGGAATTTCAATCAGAGGCAAAACTGTTGATGAATGTTCATCACAGAAACGTGGTTTCTCTTGTGGGATACTGTGATGAAGGTGATACTAAAGGACTTATTTATGAATATCTTCCAGAAGGGAACCTCCAACAAAAATTATCAGATAAGAACCCCGTTTTTTTGGAATGGACGCAAAGACTTAAAATCGCTATGGATGCAGCAAATGGGTTGGACTATTTGCATAATGGATGTAAGCCACCGGTAATTCACAGAGATTTGAAAACGTCCAACATATTACTAGATGAAAATATGCATGCCAAAATTTCAGATTTTGGAGTGTCTAAAACTTTTGCCAATGACAGTGACACTTATGTCACAACTTACCCAGCAGGCACACCAGGTTACCTTGATCCTGAATTTTATTGCTCTGGGACTCTCAACAAAAAGAGTGATGTTTATAGCTTTGGTATAATCCTACTAGAGTTAATCACTGGTCAACCAGCACTAACAGGAACGCCAGAAAATCTTAGTTACATACTTCCTTGGGTTAACAATAAACTGAGAACAGGAAATATCCAAGAAATTGTTGATCCAAGGTTACATGGGAAATACAATGGTGCTTCAGCATGGAAATTTGTAGGGATAGCCATGTCATGTCTCCCTCAAGTTCCAATTCACAGGCCTGACATAGGGCACATAGCCTTAGAATTAAAGGACTGTTTGTCTCTTGAATTATCACTTGAAAGGACAGTGAGCAACGTGAGAGAGTCATTGGCCATGAGTTCTAGACAAATTGAATTCCATTAA 2649 0.3843 MDRELQWILVLAICASSLINILAQNPQLTTYRNLANLDYSGVISIDCGVNEGYTDKTTNLQYEADDIEFGEMNNTFSTYNISQIHKQLNTLRSFPYGKRNCYTLTPKQGKNKKYIVRAYFAYGNYDSKNKAPVFDLHLGVNFLKTINASEAAVIRIEAVHFASTERIDFCLVNIDQGVPFISLLELWPLDNSIYQSSSTLLTLDLLTRLNLGASEDNFIRYTDDIYGRSWEVPNNYNKHLKTSSAIDLDKLDDLYKLPAEVLSSAVEGLHSSSLEFTLKYDTDSEYCVYLHFFDFEDRTNKQKRRLNIVINGFDDNNVTEFLTLSYWKPYSIILPIKQGMGIQKILIEANSDSDLPPMLNALEIYRVLPQSDSSTQQEDLDAIWHIKDVYRISNMNWQGDPCGPKNFTWEGVKCSNGDTPTIISLNLSSSKLSGEIDASFSNLTCLETLDLSNNELTGEVPEFFAKLPQLHFLNLSMNMLTGSVPESLKAKSSNNSLQFSFDGNLRPYQTESSKSNHKKFLIPLVASITAFVAVVLTISTIVMVIRRLRKKGKVISTISVKDDLLKSANQAFSYSEILRITNDFSTMIGKGGFGKVYLGTLECGKRVAVKILSSPSAQGYKEFQSEAKLLMNVHHRNVVSLVGYCDEGDTKGLIYEYLPEGNLQQKLSDKNPVFLEWTQRLKIAMDAANGLDYLHNGCKPPVIHRDLKTSNILLDENMHAKISDFGVSKTFANDSDTYVTTYPAGTPGYLDPEFYCSGTLNKKSDVYSFGIILLELITGQPALTGTPENLSYILPWVNNKLRTGNIQEIVDPRLHGKYNGASAWKFVGIAMSCLPQVPIHRPDIGHIALELKDCLSLELSLERTVSNVRESLAMSSRQIEFH 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01368 882 Gene3D - 203 366 - -
Viun8g01368 882 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 658 864 - -
Viun8g01368 882 SMART serkin_6 582 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01368 882 PANTHER OS07G0107800 PROTEIN-RELATED 43 855 - -
Viun8g01368 882 Gene3D Transferase(Phosphotransferase) domain 1 658 871 - -
Viun8g01368 882 FunFam Leucine-rich repeat receptor-like protein kinase 560 657 - -
Viun8g01368 882 FunFam Leucine-rich repeat receptor-like kinase 378 509 - -
Viun8g01368 882 Gene3D Ribonuclease Inhibitor 383 500 IPR032675 -
Viun8g01368 882 Gene3D Phosphorylase Kinase; domain 1 564 657 - -
Viun8g01368 882 Pfam Protein tyrosine and serine/threonine kinase 585 786 IPR001245 GO:0004672|GO:0006468
Viun8g01368 882 CDD STKc_IRAK 588 852 - -
Viun8g01368 882 Pfam Leucine rich repeat 424 480 IPR001611 GO:0005515
Viun8g01368 882 ProSiteProfiles Protein kinase domain profile. 582 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01368 882 ProSitePatterns Protein kinases ATP-binding region signature. 588 610 IPR017441 GO:0005524
Viun8g01368 882 Pfam Malectin-like domain 45 367 IPR024788 -
Viun8g01368 882 SUPERFAMILY Protein kinase-like (PK-like) 568 848 IPR011009 -
Viun8g01368 882 SUPERFAMILY L domain-like 406 489 - -
Viun8g01368 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 702 714 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01368 Viun-Chr8 21072352 21081696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01368 38 855 Receptor kinase-like Gene Family AT2G19190 40.625 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun8g01368 Malectin_like 1.3e-77 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01368 - - mtr:11437028 968.763