Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01361 ATGGAACACTTATGTGGAGCCAACGTTGGCAACATGGTTAGTAAGGCCAAGCCATATGTGTTAACTGTGGGGTTGCAATTTGGTATGGCAGGGACATACCTCTTCACCATGGCAAGTCTCAACCATGGAATGAGTCGTTTCGTGTTCATTGTGTATCGCAATGCCATTGCTGCATTGGCCCTTGCTCCCTTTGCCTTGATATTTGAAAGGAAAGTTAGGCCAAAGATGACATGGACCGTGTTCCTGCAGATACTAGTACTTGGATTTCTTGAGCCAGTGGTTGACCAAGGATTTACTTTCTTGGGGATGCAATACACTTCAGCTTCCTTTGCATCTGCTGTTATGAATGCCGTACCCTCTGTAACCTTTGTGCTTGCACTATTTCTCAGGTTGGAGCGGGTGAACATGAGGGAACTACGCAGCCAAGCGAAAGTGGTGGGAACCTTGGTGACATTTGCTGGGGCTTTGTTAATGACACTATACAAAGGCCCTCAATTTGACCTATTTCATCATTCAAACACAACTCACCAACAAAGTGGAAGCCCCTCTTCTCAGAATAATCACTCACACTGGGTCTCAGGAACTCTCTTTATTTGCCTGGGTTGTTTCGCTTGGTCTTCCTTCTACATATTGCAGTCCATAACGGTGAAAAGGTACCCTGCGGAACTGTCACTGTCGTCGTTGATATGCTTGGGAGGTGCATTGCAAAGTGCTGTGGTTGCTGTGATTGCAGATCACAACCCTCGTGCATGGGCTATCGGTTTCGACTACACCCTCTATGGCCCTCTATACACCGGAATAATGAGTTCAGGAATAGCATATTATATACAGGGGTTGGTAATGCAAAGTAGAGGTCCAGTATTTGTGACATCCTTCAATCCTCTTTGTATGATCATTGTCACTGCTTTGGGCTCCCTTCTTCTTGGAGAACATCTCTACCTTGGAAGTATCATTGGAGGCATCATTATCGCAGTGGGTCTTTACTCTGTGGTGTGGGGTAAAGGAAAAGATTATGTAGATGAGACTTCATCATCACCAGCAAGAACAAAAGAAACAGAAACAATGCAGCTCCCAGTTACCTCACCAAACAACAAATGA 1098 0.4526 MEHLCGANVGNMVSKAKPYVLTVGLQFGMAGTYLFTMASLNHGMSRFVFIVYRNAIAALALAPFALIFERKVRPKMTWTVFLQILVLGFLEPVVDQGFTFLGMQYTSASFASAVMNAVPSVTFVLALFLRLERVNMRELRSQAKVVGTLVTFAGALLMTLYKGPQFDLFHHSNTTHQQSGSPSSQNNHSHWVSGTLFICLGCFAWSSFYILQSITVKRYPAELSLSSLICLGGALQSAVVAVIADHNPRAWAIGFDYTLYGPLYTGIMSSGIAYYIQGLVMQSRGPVFVTSFNPLCMIIVTALGSLLLGEHLYLGSIIGGIIIAVGLYSVVWGKGKDYVDETSSSPARTKETETMQLPVTSPNNK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01361 365 PANTHER WAT1-RELATED PROTEIN 17 342 IPR030184 GO:0016020|GO:0022857
Viun8g01361 365 MobiDBLite consensus disorder prediction 348 365 - -
Viun8g01361 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
Viun8g01361 365 MobiDBLite consensus disorder prediction 340 365 - -
Viun8g01361 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 163 - -
Viun8g01361 365 Pfam EamA-like transporter family 30 159 IPR000620 GO:0016020
Viun8g01361 365 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01361 Viun-Chr8 20957177 20960082 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01361 10 365 Nodulin-like Gene Family AT4G08300 46.779 6.32e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01361 - - gmx:100782997 635.18