Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01356 ATGGAATGTTGTAAGAAGTTTTATGAGTGGTTATGCAATGCAAAAGCATATCTGATAATATTGAGCTTGCAATTTGGTTCTGCTGGCATGTACCTTATCACCATGGATGCTCTCAACAAGGGCATGAGCCATTATGCTTTTGTTGTTTATCGCAATATCATCGCTACTGTGGCTCTTGGTCCATTCGCATTTTTTCTTGAAAGGAAAGTTAGGCCGAAGATGACAGTTCGGATATTTTCAGAGCTTATGGCAGTGGCTTTTGTCGAGATAATACTAGATCAATGCTTCACCTTCTTGGGAATGAAGTACACCTCAGCATCATTTGCATCTGCAGTGATGAATTCCGTACCCTCCCTTACCTTCGTACTAGCAATCATTTTCAGATTGGAGCGTATGAAGCTTAAAGAGTTTGGATGCTTAGCAAAAATGATTGGCACTGTGGTTTCTCTGGGAGGTGCTTTTCTAATGACACTGTACAAAGGTCCTATTATTAACATTGCAGGCTCATCAGCCACCAACGTTGGCCAGCCTGAGAATGTGAACGACCCTTCTGGAACTCATTGGCTCACTGGTGCATGTTTTCTCCTCATTGGCTGTGCTGGCTTCTCTGCTTTCTACATATTACAAACTATAACATTGAAAAAGTACCCAGCAGAGATGTCCCTAGCAACTTGGGTATGCTTTTTGGGTGCCCTTCAAAGCGGTGTACTTACAATTTTCATGGAGCGCAATACCCATGTCTGGTCTGTGGGCTGGGATTCTAGGCTTCTTGCTTATGCATATTCGGGAATAGTAACATCAGCAATCCAATTTTACGTGCAAGGCATGGTTATTAAAACCACAGGGCCAGTGTTTGTGACTGCATTTAATCCCCTGCGTATGATCATAGTCACAGCCTTGGCCTGCATAGTCCTCTCGGAGAAACTCCACCTTGGAAGCATTATAGGAGGAGTTGTGGTGGTAGTAGGGCTTTACCTAGTTGTGTGGGGAAAATCTAAGGAACAGAAGAAGAATTTGATGGCAGCGTCCCCTGAAAAGGTGACCCTGCAACGCCAGAAACAGCTACCACTTAGTGTACTCAGAAGTGAAGACAACAATGATAACAAACCTCAATTGGTCATAATTGGAGACAAAAACCACGACATGGAAGAAGGAAGAACAGTGACTATAGAGAACCTGCAACAGTGA 1188 0.4343 MECCKKFYEWLCNAKAYLIILSLQFGSAGMYLITMDALNKGMSHYAFVVYRNIIATVALGPFAFFLERKVRPKMTVRIFSELMAVAFVEIILDQCFTFLGMKYTSASFASAVMNSVPSLTFVLAIIFRLERMKLKEFGCLAKMIGTVVSLGGAFLMTLYKGPIINIAGSSATNVGQPENVNDPSGTHWLTGACFLLIGCAGFSAFYILQTITLKKYPAEMSLATWVCFLGALQSGVLTIFMERNTHVWSVGWDSRLLAYAYSGIVTSAIQFYVQGMVIKTTGPVFVTAFNPLRMIIVTALACIVLSEKLHLGSIIGGVVVVVGLYLVVWGKSKEQKKNLMAASPEKVTLQRQKQLPLSVLRSEDNNDNKPQLVIIGDKNHDMEEGRTVTIENLQQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01356 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 333 - -
Viun8g01356 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Viun8g01356 395 Pfam EamA-like transporter family 27 157 IPR000620 GO:0016020
Viun8g01356 395 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Viun8g01356 395 PANTHER WAT1-RELATED PROTEIN 18 340 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01356 Viun-Chr8 20808967 20812968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01356 15 367 Nodulin-like Gene Family AT1G44800 45.763 2.80e-111 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01356 - - gmx:100813852 647.506