Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01355 ATGGAAGACCAAAATGGTTCGGGTGGATTTGGCAAAAGGTTCCGCAAGGCTAAGCCTTACCTTGCTATGGTGTCCCTTCAGTTCGGTTACTCAGGAATGTATATCATCACCATGGTTTCTTTCAAACACGGCATGAGCCATTGGGTACTCTCAGTGTACCGTCACATAGTTGCCACTCTCATCATGGCCCCTTTTGCATTTTTTCTTGAAAGAAAAATACGACCAAAGATGACTCTCCCTGTGTTCCTGAGGCTAGCGGTACTTGGCTTCGTTGAGCCAGTGCTTGATCAAAACTTGTACAACATGGGTATGAAGAACACCTCAACAACGTTTGCATCGGCCACAGTTAATGTTCTCCCAGCCATTACTTTTATAATGGCACTTATTTTCAGGTTAGAGACGGTGAATTTGAGAAAACTACACAGCGTGGCCAAGGTAATTGGAACCGCAGTAACAGTAACAGGAGCCATGGTTATGACTTTGTACAAAGGCTCAGCCCTTCACTTCGTCAAGGGTCAAGCAACCCACCATGAAAGTGGCAGCACCACACAACCATCTGAACAAAACTGGGTGCTTGGCACAGTAATGCTCCTAGCAAGTTGTGGTGGTTGGGCTAGTTTCTTTATCTTGCAATCTTTCACTTTGAAGATGTACCCCGCAGAGCTCTCAGTCACAGCTTGGATTTGCTTTTTGGGCATTTTTGAGGGTTCAATTGCAACCCTTATATTTGAACGTGACATGAGTGTTTGGTCCATAGGCATGGACTCAAGGCTCCTTGCTTGTGTTTATTCTGGTGTGGTGTGTTCTGGAATGGCATACTATGTACAAGGAGTTGTGACCAGAGAACGTGGACCTGTGTTTGTGACTTCTTTCAGTCCACTGTGTATGATTATCACTGCTGCATTGGGATCAATTGTCTTGGCTGAGCAAGTTTACATGGGAAGTGTAATTGGAGCTATTATCATTGTGAGTGGACTTTATACAGTGGTATGGGGAAAAAGCAAAGACAATGTGAAGAAAAGCGAGGCAGAGAAAAGTGAAGGCCAAGAATTGCCAATTAAGGACAGTGCAGCATCAGGATCAGGAATTTTTGACAGCATTGAGATCAATGTTCCTTCTGGGCAAGGAAGGAATGTTCTTGCATCACCAAGAACATAG 1158 0.4447 MEDQNGSGGFGKRFRKAKPYLAMVSLQFGYSGMYIITMVSFKHGMSHWVLSVYRHIVATLIMAPFAFFLERKIRPKMTLPVFLRLAVLGFVEPVLDQNLYNMGMKNTSTTFASATVNVLPAITFIMALIFRLETVNLRKLHSVAKVIGTAVTVTGAMVMTLYKGSALHFVKGQATHHESGSTTQPSEQNWVLGTVMLLASCGGWASFFILQSFTLKMYPAELSVTAWICFLGIFEGSIATLIFERDMSVWSIGMDSRLLACVYSGVVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQVYMGSVIGAIIIVSGLYTVVWGKSKDNVKKSEAEKSEGQELPIKDSAASGSGIFDSIEINVPSGQGRNVLASPRT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01355 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Viun8g01355 385 MobiDBLite consensus disorder prediction 341 360 - -
Viun8g01355 385 PANTHER WAT1-RELATED PROTEIN 18 342 IPR030184 GO:0016020|GO:0022857
Viun8g01355 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 334 - -
Viun8g01355 385 Pfam EamA-like transporter family 31 150 IPR000620 GO:0016020
Viun8g01355 385 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01355 Viun-Chr8 20766632 20770954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01355 11 370 Nodulin-like Gene Family AT4G08300 62.810 1.79e-166 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01355 - - gmx:100814921 657.136