Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01349 ATGGATTCTTCGGCGAAACTCATCCCAAGAAAAAGAGCATCCAAGAATACTACACCGGTGAAGAATAACAGACCGAAGAAGAATAGCACGCCGAAGAAGAAGAGCACGCCGAAGAAGAAGAAGAGCACGCCGCCGAATAAAACACCTAACAAAACTGAATCAGAAGTTGCTTCAGCAGGATCTGCTTACAAGTTTGATCTGAGGTTGGAGGCAAAGCTGTCTGCGGAGATTGATAAGAAGGTGTACGCTGGAAGGAGAATACATCCCTTTTTTACCTTGTGGAAAGAGGATAACGAACGACAGCGGCGACAAGCTTTATTGGCTAGAAGGAAAGGAAAAGGAATTAGTAGTTCCTGTCATGTATTTGAAGATGTTCAGGATAATGCCTCACCCATCGACTGGGGTGACTGGACATTTTTGGACAAGACCACAGTTGCATCTTTTGGTACACAGGGTTCAAATTTATCTTTTATGGATGGTTCGGTTGAATCCTTAAATTTTGATAACATAAGTAGCATTTCGAAATTCTCAAGTGCTTCTATGCCTGAGAATGTAATGTGTTGTCCAAGCCAACTTTCTACACAGCCAGATAGTAATAGTAAGCTGGAAATATCATCCCCAAATTCAGTAGTCTTAGAGAAAGCTAAGTGTCTTTTGAAGTCAGAAGATGTCGATGTGGATCTGGGGTTGGAGGTGAATGAAAATACTTTCTCAGGACACAAGGACATTTTCAGAAAACAGGATATTGAACCGCAGAGTGAATTTCTTCAAGCAAGTATGGGGTCTTACTACCATAGTTGTGAAGGTAACATCAGCTTATGGACAGACAAGTACAAGCCAAAAACCGTCTCTGAGGTGTGTGGAAATGAAGAGGCTATGAATTTCTTGCGTTACTGGTTACATCTTTGGCATAAAAGACCTTCTCAATGCACAAAAAGTTCCTCTAAGGAATGTCAAAGAAAACCTTCTCAGTGCAGAAAAAGGTCCTCTAAGAAGGGTCAACAAGACGATACACTTGACCATGCTCCAGAAAATATAGATGAGGGTCACGTGCAGAGTGTTCTCTTGATTACAGGACCAAGTGGGAGTGGCAAGTCTGCAGCTGTCTATGTTTGTGCCCAAGAGCTAGGGTTTAAAGTTGTAGAGATCAATGCATCAAGTTGTCGAGATGGAACTGCTATCACTGATATCAAGAATAAACTAGAAGAACCTGATGCAGGAAAAATCACAAGGTGGTTGCTTCCTCGTTCTGTTGAAGCTCGCCCAACTTTAATTCTAGTTGAGGATGTGGACATTATATTTCCTGAAGATCGTGGTTGTATCACTGCCATACGACAACACTTCTCGGCCACAGAAAAATGGCCTATTATATTCACCAGCAACAGAAATTGTGGTGGCCTACCAAAAAGTTTTGAAAGACTACATGTTTCTTTCTCATATCCATTGCCAGATGAGTTACTTCGCCATATAGAAAAGGTTTGCGTCACAGAAGAAGTCAATATCAATCCTCTCCTACTGAAAAAAATTATCCAGTCTTGTGATGGAGATATTCGGAAAACTATTATGCAACTTCACTTCTGGTGCCAAAGTAAAAAGTATAGCGAAGACAGGAAAGTGGGAAAGGTGTATGGTATGCTTCCTTTTGATGTTGAGGCTTGTCACCACATTATACCAAAGATACTACCCTGGAATTTTCCCTCAGAGTTGTCCCAACTCATTGAGAAGGAAGTTGCTAAGTCAATAGCCACAATGGATGAAAACTCGTATTTGCAGGTGTTAGTTAACCAAGAGCTAGACATAAATGAAAAGAAAGATAAGGTGAAGAGAATCAAGAGATCTCTTGCAGACTGCAATGGGTTTGAAAGTCAACAAAGTGCTATTTCTGAATTTTCAAACTGCTCTGGATCCCCGGTAACATCCTCTTCAGACGTTCATGAGGAAGTTTACAAGAGACATTCCCTTGAAAGCAACAGTGACTATCTCTTTAAGTTTCAAATGAATCAAGCCTATCTAAGTTCATCATTTTCCAAACCGGTTAGTTCAATTTTGGAAAGAGAAACTACTTATGATGCATGCTTAAATGAAACGTATAAATCATTTTATGCATCGAGTTTACATGGATCAATATCCGTTCCTGAGGCAGCAATTCAAAGTGGAATAAAGCCAATGACTGGACCAGTGTCTGGTTCAGTAGAAGGATCTTCTCTTGATAATGAGCTGACACCGACCACTTTCACTTTTTGTCAATCCTCAGACAAATTGCCACCAAATTCTTATCCATTTGCAAATCCTGAAATTCTAGAATCTTCTTTTACAAAAGCAGTTGTGCAAAATTTCAGAGATGGGAATACAAAAACCACAACTGTGAGTAATGCCATAGATGCGTGCAGTCATATTGATTCTACATCAAACTCAAAGTCTTTTGACTCTAGTCCATCGATACCAATGGATATGGTACAAGAATTGTGGAGGGAACTTCGTACATGTCGAAAGGATTTAGGACAGGATGACGACCAAGAACAACAAAATGTTATTCAAGTTCTTAAACTTACTAGTGGGCTGACCGATCTAATTTCTGAAGCTGACTTATTGTTTCGTGATCACCAACCAAAACAATGTGGTATGATGGAGCCTTCGATGACACTTTTTGAAGAAGCCACAAAGAGTTGGTATGATGAGCAAATGATGATGTCTACAGTTGCTGTACATGGTTTTTCTTTTTATGCCAAACATATATCAGATGTAGGATCCAAGTTTGGTTATGAGAACGAGGTAGATCTAATCTCAGAGATGTTGGCTAGCACTACTAATGTTATGGCACTGGGAAAATTGTCTAGACAAGACCAAATAAAAAGTACCAACATATATGACAATAAGCTATTGAAGATGAATGACCTGACAAATGATACCAAAACATCTTTTTCCAGCGTGATCCGGTCCATGATGCCAGCATTATCATCCTTGTCAGTGAGAGGTCTTGCATTAAGTGAATATATATCTTCACTACGCCAAATCTCAATTTCTGAAGGTTTTCGCATTTCACATGATTCAGAAAATACGAGAAAACGAAGAAAAGTTGATCGACATTATTTGAGCAGAGGTAAATTGAAGTTGACTCCTGAAGATATATCATTGGTGTGCAAAGGTGATTTATACAGAAAGATTTCTTCACAGTACATTGCTAAAATGGAAAGCAAAAGTGCATGA 3207 0.3951 MDSSAKLIPRKRASKNTTPVKNNRPKKNSTPKKKSTPKKKKSTPPNKTPNKTESEVASAGSAYKFDLRLEAKLSAEIDKKVYAGRRIHPFFTLWKEDNERQRRQALLARRKGKGISSSCHVFEDVQDNASPIDWGDWTFLDKTTVASFGTQGSNLSFMDGSVESLNFDNISSISKFSSASMPENVMCCPSQLSTQPDSNSKLEISSPNSVVLEKAKCLLKSEDVDVDLGLEVNENTFSGHKDIFRKQDIEPQSEFLQASMGSYYHSCEGNISLWTDKYKPKTVSEVCGNEEAMNFLRYWLHLWHKRPSQCTKSSSKECQRKPSQCRKRSSKKGQQDDTLDHAPENIDEGHVQSVLLITGPSGSGKSAAVYVCAQELGFKVVEINASSCRDGTAITDIKNKLEEPDAGKITRWLLPRSVEARPTLILVEDVDIIFPEDRGCITAIRQHFSATEKWPIIFTSNRNCGGLPKSFERLHVSFSYPLPDELLRHIEKVCVTEEVNINPLLLKKIIQSCDGDIRKTIMQLHFWCQSKKYSEDRKVGKVYGMLPFDVEACHHIIPKILPWNFPSELSQLIEKEVAKSIATMDENSYLQVLVNQELDINEKKDKVKRIKRSLADCNGFESQQSAISEFSNCSGSPVTSSSDVHEEVYKRHSLESNSDYLFKFQMNQAYLSSSFSKPVSSILERETTYDACLNETYKSFYASSLHGSISVPEAAIQSGIKPMTGPVSGSVEGSSLDNELTPTTFTFCQSSDKLPPNSYPFANPEILESSFTKAVVQNFRDGNTKTTTVSNAIDACSHIDSTSNSKSFDSSPSIPMDMVQELWRELRTCRKDLGQDDDQEQQNVIQVLKLTSGLTDLISEADLLFRDHQPKQCGMMEPSMTLFEEATKSWYDEQMMMSTVAVHGFSFYAKHISDVGSKFGYENEVDLISEMLASTTNVMALGKLSRQDQIKSTNIYDNKLLKMNDLTNDTKTSFSSVIRSMMPALSSLSVRGLALSEYISSLRQISISEGFRISHDSENTRKRRKVDRHYLSRGKLKLTPEDISLVCKGDLYRKISSQYIAKMESKSA 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01349 1068 Gene3D - 481 543 - -
Viun8g01349 1068 MobiDBLite consensus disorder prediction 319 344 - -
Viun8g01349 1068 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 273 534 IPR027417 -
Viun8g01349 1068 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 483 544 - -
Viun8g01349 1068 Pfam ATPase family associated with various cellular activities (AAA) 355 441 IPR003959 GO:0005524|GO:0016887
Viun8g01349 1068 Gene3D - 272 476 IPR027417 -
Viun8g01349 1068 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 6 1057 IPR004582 GO:0006281
Viun8g01349 1068 MobiDBLite consensus disorder prediction 1 57 - -
Viun8g01349 1068 MobiDBLite consensus disorder prediction 26 45 - -
Viun8g01349 1068 Coils Coil 593 613 - -
Viun8g01349 1068 MobiDBLite consensus disorder prediction 312 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01349 Viun-Chr8 20575803 20585065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01349 274 530 Core DNA Replication Machinery Family AT5G22010 21.805 2.10e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01349 K26118 - gmx:100815984 1150.58