Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun8g01306 | ATGGCAAAGATGATGGGTCTCTTGCTCATGATTGGAGCGATGATGTTCGGAGTAAGAGGTGAGCCAACGGAAGATAAACAAGCATTGCTTGATTTCCTTCACAACATTAGCCACTCTCATCATCTGATCAACTGGGACAAGAGCTCTTCTGTGTGCAAAAGTTGGATAGGAGTGACCTGCAACTCTGAGCAATCACATGTTATTGCCATCCAACTCACCAGAACTGGATTGAGGGGTCGAATCCCACCCAACACTCTTAGTCGTCTCTCAGCGCTCCAAACTCTGAGTCTTGCCTCAAATAGCTTAACTGGTTCTTTCCCTTCTGATTTCTCTCAGCTAAATAATTTGATCTATCTGTATCTCCAATTCAACAGATTTTCTGGTCCATTGCCATCAGACTTTTCAGTGTGGAAGAATCTTAGTATTGTCAATTTATCCAACAATTCTTTTAATGGGAGCATCCCATTTTCACTTTCAAATTTGACTCATCTCTCTTCTTTAGTTCTAGCCAACAACACCCTTTCGGGTGACATTCCTGATCTCAATAATTTTGCCAACAATAACCTTAGTGGGATTGTGCCTGAATCCTTGGAGAGATTTCCAAGAGTAGCGTTTTCTGGTAACAATCTTGCTTCTTCACATGCTCTTTCCCCTTCTTTTCTTATTCAACCCCCAAATTCTAATCCAACAAGGAAAAAATCCAAAGGACTTAGGGAACCAGCCTTGTTGGGTGTCATTATTGGTGCTTGTGTCCTGGGAATTGCAGTGATAACAGCTTTTGTGATCGTGTGTTGCTATGAGAAAGGTGGTACAAGTGGACAACAAGTGATGTGTCAGAAAGGAGAAACATCCAGGAAAAAGGAAGGTTCTGAAAGTCGAGACAAGAACAGAATTGTTTTCTTTGAGGGTTGCGCTCTTGCATTTGACTTGGAGGACTTGTTGAGAGCATCTGCTGAAGTGCTTGGAAAGGGCACGTTTGGGACGGTGTACAAGGCTGCTCTAGAAGACACAACAACCGTGGCAGTGAAAAGGTTGAAGGATGTCATTGTCGGAAAACGCGAGTTTGAACAACAGATGGAGATGGTCGGAAGGATTAGGCACGATAATGTGGCTGCTTTAAGGGCATATTACTATTCAAAGGAGGAGAAACTTATGGTATATGATTACTACGAACAGGGTAATGTGTCTTCAATGTTGCATGGCAAAAGAGAAGGAAGTAGAATTTCTTTAAACTGGGATAGCCGTTTGAAAATAGCAATTGGTGTAGCAAGAGGCATTGCTCACATCCATGCTCAAGAAGGAGGAAAACTCCTCCATGGAAACATAAAGTCCTCTAACATCTTCCTCAACCCACGAGGATATGGTTGTGTATCTGACATTGGTCTTGCAACACTGATAAATCCAGCAACGAGAACAACAGGATACCGTGCCCCAGAAGCCACGGACACCCGAAAATCGGTACCCGCATCTGATGTGTATAGTTTTGGTGTGCTGCTACTTGAGCTTCTAACTGGGAGGTTTCCCTTACATGCCAAAGGAGGTGAGGAAGTTGTCCACTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAAGAGTGGACTGCAGAAGTGTTTGATGTGGAGTTGCTGAGGTATCCAAATATTGAGGAGGAAATGGTTGAGATGCTGCAAATAGGGATGGCATGTGTTGTGAGAACACCAGATCAGAGGCCAAAGATCGGGGATGTGGTGAGAATGGTGGAGGAAATTCGTAGGGTAAATGCCGAAAATAGATCATCCACTGAATCAAGGTCAGAAGGTTCCACTCCAACCCCTCATTCCATTGAGATACCTTCAACCTCTTTTGCATAA | 1848 | 0.4356 | MAKMMGLLLMIGAMMFGVRGEPTEDKQALLDFLHNISHSHHLINWDKSSSVCKSWIGVTCNSEQSHVIAIQLTRTGLRGRIPPNTLSRLSALQTLSLASNSLTGSFPSDFSQLNNLIYLYLQFNRFSGPLPSDFSVWKNLSIVNLSNNSFNGSIPFSLSNLTHLSSLVLANNTLSGDIPDLNNFANNNLSGIVPESLERFPRVAFSGNNLASSHALSPSFLIQPPNSNPTRKKSKGLREPALLGVIIGACVLGIAVITAFVIVCCYEKGGTSGQQVMCQKGETSRKKEGSESRDKNRIVFFEGCALAFDLEDLLRASAEVLGKGTFGTVYKAALEDTTTVAVKRLKDVIVGKREFEQQMEMVGRIRHDNVAALRAYYYSKEEKLMVYDYYEQGNVSSMLHGKREGSRISLNWDSRLKIAIGVARGIAHIHAQEGGKLLHGNIKSSNIFLNPRGYGCVSDIGLATLINPATRTTGYRAPEATDTRKSVPASDVYSFGVLLLELLTGRFPLHAKGGEEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGMACVVRTPDQRPKIGDVVRMVEEIRRVNAENRSSTESRSEGSTPTPHSIEIPSTSFA | 615 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun8g01306 | 615 | PANTHER | OS05G0588300 PROTEIN | 7 | 592 | - | - | |
Viun8g01306 | 615 | Pfam | Leucine rich repeat | 80 | 126 | IPR001611 | GO:0005515 | |
Viun8g01306 | 615 | FunFam | Probable inactive receptor kinase RLK902 | 22 | 182 | - | - | |
Viun8g01306 | 615 | ProSiteProfiles | Protein kinase domain profile. | 315 | 582 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun8g01306 | 615 | SUPERFAMILY | L domain-like | 30 | 202 | - | - | |
Viun8g01306 | 615 | Gene3D | Ribonuclease Inhibitor | 22 | 229 | IPR032675 | - | |
Viun8g01306 | 615 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 390 | 594 | - | - | |
Viun8g01306 | 615 | SUPERFAMILY | Protein kinase-like (PK-like) | 319 | 580 | IPR011009 | - | |
Viun8g01306 | 615 | ProSitePatterns | Protein kinases ATP-binding region signature. | 321 | 352 | IPR017441 | GO:0005524 | |
Viun8g01306 | 615 | Gene3D | Phosphorylase Kinase; domain 1 | 280 | 389 | - | - | |
Viun8g01306 | 615 | FunFam | pollen receptor-like kinase 1 | 283 | 389 | - | - | |
Viun8g01306 | 615 | Gene3D | Transferase(Phosphotransferase) domain 1 | 390 | 602 | - | - | |
Viun8g01306 | 615 | MobiDBLite | consensus disorder prediction | 592 | 615 | - | - | |
Viun8g01306 | 615 | Pfam | Leucine rich repeat N-terminal domain | 23 | 61 | IPR013210 | - | |
Viun8g01306 | 615 | MobiDBLite | consensus disorder prediction | 586 | 615 | - | - | |
Viun8g01306 | 615 | Pfam | Protein kinase domain | 318 | 576 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun8g01306 | Viun-Chr8 | 19544564 | 19547925 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun8g01306 | 14 | 607 | Receptor kinase-like Gene Family | AT4G23740 | 54.896 | 0.0 | 657 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Viun8g01306 | Pkinase | 5e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun8g01306 | - | - | gmx:100810095 | 1017.3 |