Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01263 ATGGAATATGGCAGATTGGGGCCCAACGACCCAGGTGGCTCCTCACGCCGCTCCACCACTCCTCTTACCAAACTACCCCCTTCTTCGTCTTCCGCAACCACCAAAAGAAAACTCATCATTCTCTCGATTCTCGCAACCGTCTTAATCGTCGCCGCTGCCATCACCGCCGTCCTCGTCACCGTGGTCCGCTCCCGCGCCTCCGGTAACCAAAACGGACCCAACCTATCCCGCAAGCCTACTCAGGCAATATCCCGAACCTGCAGCAAGACACGTTTCCCAACCTTATGCATCAACTCTCTCATTGACTTCCCCGGCTCAACCACTGCCTCGGAGCAAGACCTCGTCCACATCTCATTCAACATGACCCTCCGCCACGTCAGCAGAGCGTTCTTCGCCTCCTCCGGCCTCTCCTTCGCTGCCACCGAACCCAAAGTTCGGGCGGCGTACGACGATTGCCTCGAGTTATTGGAGGAGTCGATGGACTCTCTTTCCCGATCCCTCGACTACATCCTCTCGCCTTCCGCTATATCCGACAGCGGCGGGTTGAGACCCGGCTCTGATGGATCTACCGACGATGTGATAACGTGGCTCAGCGCCGCCCTCACTAATCATGACACGTGTGCGGAGGGCTTCGAGGACTCGAGCGGGAGCTTGAAGGACCAGATGGTTAATAACTTGAAGGACTTGTCTGAACTCGTGAGCAATTGTCTCGCGATATTCTCTGCGAGTGGAAGTGGCGATTTCTCGGGGGTGCCTATTCAGAATAAGAGACGATTAATGGAAGAAGAAGATGGTGAAGCTAATGTTAACGATGATATATTGGGGAAATTCCCGAGATGGTTGAATAAACGTGATAGAAGATTATTGAGTTTGCCCACGTCAGCAATTCAAGCAGATATAGTGGTGTCTAAGAACGGTGACGGAACAGTGAAGACAATTGCGGAGGCCATTAAGAAAGCGCCGGAACACAGCAGTCGCCGGTTCATCATTTACGTGAGGGCAGGAAGGTATGAGGAGAATAATTTAAAGGTGGGCAGAAAGAAAACGAATGTGATGTTCATAGGAGATGGGAAGGGCAAAACTGTCATTACAGGGAAAAAGAATGTGATAGATGGCATGACCACATTCCACACTGCATCCTTCGCTGCTAGTGGTGCTGGATTCATGGCACGTGATATCACGTTCGAGAACTATGCCGGACCGGTGAAGCACCAAGCGGTGGCGCTCCGCGTTGGAGCCGACCACGCGGTGGTGTACCGGTGCAACATTCAGGGGTACCAAGACTCACTCTATGTCCATTCTAATCGTCAATTTTTTCGTGAATGTGACATTTACGGTACTGTAGACTTCATATTTGGCAATGCTGCGGTCGTTTTCCAGAAATGTAATATTTATGCCCGTAAGCCCATGGCCCAACAGAAGAACACCATTACAGCCCAGAATAGAAAAGACCCAAATCAGAATACGGGCATATCCATGCACAATTGTCGGATCCTACCTGCTTCGGATCTTGTGCCCGTTAAGGGCAGCTTTCCCACCTATTTGGGCCGTCCATGGAAGCAGTTCTCTAGAACAGTGTTCATGTTATCCTACATGGGTGACCACATACATCCCCGTGGATGGTTGGAATGGAATGGAGACTTCGCTTTGGACACATTGTATTATGGTGAGTACATGAATTATGGTCCGGGTGCAGCTGTGGGCCAACGGGTCAAATGGCCTGGGTACCGGGTCATTACCTCTTCTGTGGAGGCAAATAGGTTCACGGTGGCCCAGTTTATATCCGGGTCAGCCTGGTTACCATCCACTGGAGTGGCTTTTGCGGCCGGCTTATCCGCATGA 1842 0.5152 MEYGRLGPNDPGGSSRRSTTPLTKLPPSSSSATTKRKLIILSILATVLIVAAAITAVLVTVVRSRASGNQNGPNLSRKPTQAISRTCSKTRFPTLCINSLIDFPGSTTASEQDLVHISFNMTLRHVSRAFFASSGLSFAATEPKVRAAYDDCLELLEESMDSLSRSLDYILSPSAISDSGGLRPGSDGSTDDVITWLSAALTNHDTCAEGFEDSSGSLKDQMVNNLKDLSELVSNCLAIFSASGSGDFSGVPIQNKRRLMEEEDGEANVNDDILGKFPRWLNKRDRRLLSLPTSAIQADIVVSKNGDGTVKTIAEAIKKAPEHSSRRFIIYVRAGRYEENNLKVGRKKTNVMFIGDGKGKTVITGKKNVIDGMTTFHTASFAASGAGFMARDITFENYAGPVKHQAVALRVGADHAVVYRCNIQGYQDSLYVHSNRQFFRECDIYGTVDFIFGNAAVVFQKCNIYARKPMAQQKNTITAQNRKDPNQNTGISMHNCRILPASDLVPVKGSFPTYLGRPWKQFSRTVFMLSYMGDHIHPRGWLEWNGDFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSSVEANRFTVAQFISGSAWLPSTGVAFAAGLSA 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01263 613 Pfam Plant invertase/pectin methylesterase inhibitor 82 239 IPR006501 GO:0004857
Viun8g01263 613 CDD PMEI-like_3 87 242 - -
Viun8g01263 613 MobiDBLite consensus disorder prediction 12 30 - -
Viun8g01263 613 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 81 241 IPR035513 -
Viun8g01263 613 ProSitePatterns Pectinesterase signature 2. 444 453 IPR033131 -
Viun8g01263 613 FunFam Pectinesterase 293 611 - -
Viun8g01263 613 Gene3D - 293 611 IPR012334 -
Viun8g01263 613 FunFam Pectinesterase 79 243 - -
Viun8g01263 613 PANTHER PECTINESTERASE 52 601 - -
Viun8g01263 613 NCBIfam pectinesterase inhibitor domain 52 240 IPR006501 GO:0004857
Viun8g01263 613 Pfam Pectinesterase 299 596 IPR000070 GO:0030599|GO:0042545
Viun8g01263 613 Gene3D Invertase/pectin methylesterase inhibitor family protein 80 243 IPR035513 -
Viun8g01263 613 SMART PMEI_2 78 239 IPR006501 GO:0004857
Viun8g01263 613 MobiDBLite consensus disorder prediction 1 30 - -
Viun8g01263 613 SUPERFAMILY Pectin lyase-like 293 610 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01263 Viun-Chr8 18489170 18493215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01263 1 612 Carbohydrate Esterase AT5G53370 63.740 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01263 - - gmx:106796002 1016.53