Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01248 ATGGATGCAGTAACTGCATTTTCAAGCTGCGGTGGAGTAACAGATGGAACACTCCTCCATTCCCAAAACCTCACTCCCATCCAATCCACCATCTCTGCAACTATTGATTCTCAGTCATCCATTTGCGTTGGGAGCCCAGTGTCTGCTAACAAACCAAATGGAAGAGATAACGAAGTGAAAGGGGCCACCACAACAAGTGGTTCCTCACGTGACCCATCAGATGAAGACGATGAAGCAGGTCTCTGTGAACAAAGCACAAACGCTGTTGACACCAAGCGTCTTAGAAGGAAGGATTCTAATAGAGAGTCTGCAAGGAGATCCAGAAGAAGAAAACAAGCCCATTTGGCTGACCTGGAGTGGCAAGTTGAACGGCTGAGGCAGGAAAATTCACACCTATTCAAGCAGCTAAGGGATGCAAGCCAACAATTCCGTGATGCTGATACCAATAATCGAGTGCTAAAATCAGATGTCGAAGCTTTAAGAGCTAAGGTAAAGTTAGCTGAGGACATGGTGAGAAGGGGTACAATTCCCCCATTCAACAACCAGATTCTTCCAAACCTGAGTGAATTGAGCACTCCTTCACCTCTGAACAGCAATATGAATAATCTGCGTCGCATGGCACATGTCTCACCAACCATCACTGTGCATGGGAACGATGGTGCTTCATATGGTGCTGGAATCACACATAACTCACCTCTTGAGCTTGGAAACTTGGACATACCTTGCACAGATTTCAATAGTGATAATGCTGTCAGCTCTATCACTACCATGTGGCCTTAA 780 0.459 MDAVTAFSSCGGVTDGTLLHSQNLTPIQSTISATIDSQSSICVGSPVSANKPNGRDNEVKGATTTSGSSRDPSDEDDEAGLCEQSTNAVDTKRLRRKDSNRESARRSRRRKQAHLADLEWQVERLRQENSHLFKQLRDASQQFRDADTNNRVLKSDVEALRAKVKLAEDMVRRGTIPPFNNQILPNLSELSTPSPLNSNMNNLRRMAHVSPTITVHGNDGASYGAGITHNSPLELGNLDIPCTDFNSDNAVSSITTMWP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01248 259 SMART brlzneu 88 152 IPR004827 GO:0003700|GO:0006355
Viun8g01248 259 SUPERFAMILY Leucine zipper domain 92 142 IPR046347 GO:0003700|GO:0006355
Viun8g01248 259 Coils Coil 108 142 - -
Viun8g01248 259 MobiDBLite consensus disorder prediction 45 113 - -
Viun8g01248 259 Gene3D - 91 147 - -
Viun8g01248 259 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 90 153 IPR004827 GO:0003700|GO:0006355
Viun8g01248 259 PANTHER BASIC LEUCINE ZIPPER 63 18 247 - -
Viun8g01248 259 Pfam bZIP transcription factor 91 138 IPR004827 GO:0003700|GO:0006355
Viun8g01248 259 CDD bZIP_plant_GBF1 93 144 IPR045314 GO:0003700|GO:0006355
Viun8g01248 259 MobiDBLite consensus disorder prediction 45 69 - -
Viun8g01248 259 FunFam BZIP transcription factor 90 141 - -
Viun8g01248 259 Coils Coil 150 170 - -
Viun8g01248 259 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 95 110 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01248 Viun-Chr8 17993775 17999027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01248 17 259 bZIP Transcription Factor Family AT5G24800 48.221 6.88e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun8g01248 bZIP_1 1.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01248 K25784 - gmx:100776831 381.333