Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01247 ATGGAGACCAAGTTGGGCGGCGGCGGCGGCGGCGGCGTTATGGCGGCTACCTTCGACGAATTCAAATGGATCTCCTTTATGTTCGATCACGACATAAACGACGACGTCAAACCCTGCAAGCTCGACCCCTTCACCGGCGCTTCTGGTCACCTCAACGACGCTTTCGAAAATCTGGATGCAGTAACTGCATTTTCAAGCTGCGGTGGAGTAACAGATGGAACACTCCTCCATTCCCAAAACCTCACTCCCATCCAATCCACCATCTCTGCAACTATTGATTCTCAGTCATCCATTTGCGTTGGGAGCCCAGTGTCTGCTAACAAACCAAATGGAAGAGATAACGAAGTGAAAGGGGCCACCACAACAAGTGGTTCCTCACGTGACCCATCAGATGAAGACGATGAAGCAGGTCTCTGTGAACAAAGCACAAACGCTGTTGACACCAAGCGTCTTAGAAGGAAGGATTCTAATAGAGAGTCTGCAAGGAGATCCAGAAGAAGAAAACAAGCCCATTTGGCTGACCTGGAGTGGCAAGTTGAACGGCTGAGGCAGGAAAATTCACACCTATTCAAGCAGCTAAGGGATGCAAGCCAACAATTCCGTGATGCTGATACCAATAATCGAGTGCTAAAATCAGATGTCGAAGCTTTAAGAGCTAAGGTAAAGTTAGCTGAGGACATGGTGAGAAGGGGTACAATTCCCCCATTCAACAACCAGATTCTTCCAAACCTGAGTGAATTGAGCACTCCTTCACCTCTGAACAGCAATATGAATAATCTGCGTCGCATGGCACATGTCTCACCAACCATCACTGTGCATGGGAACGATGGTGCTTCATATGGTGCTGGAATCACACATAACTCACCTCTTGAGCTTGGAAACTTGGACATACCTTGCACAGATTTCAATAGTGATAATGCTGTCAGCTCTATCACTACCATGTGGCCTTAA 951 0.4784 METKLGGGGGGGVMAATFDEFKWISFMFDHDINDDVKPCKLDPFTGASGHLNDAFENLDAVTAFSSCGGVTDGTLLHSQNLTPIQSTISATIDSQSSICVGSPVSANKPNGRDNEVKGATTTSGSSRDPSDEDDEAGLCEQSTNAVDTKRLRRKDSNRESARRSRRRKQAHLADLEWQVERLRQENSHLFKQLRDASQQFRDADTNNRVLKSDVEALRAKVKLAEDMVRRGTIPPFNNQILPNLSELSTPSPLNSNMNNLRRMAHVSPTITVHGNDGASYGAGITHNSPLELGNLDIPCTDFNSDNAVSSITTMWP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01247 316 MobiDBLite consensus disorder prediction 102 126 - -
Viun8g01247 316 SUPERFAMILY Leucine zipper domain 149 199 IPR046347 GO:0003700|GO:0006355
Viun8g01247 316 FunFam BZIP transcription factor 147 198 - -
Viun8g01247 316 Coils Coil 165 199 - -
Viun8g01247 316 MobiDBLite consensus disorder prediction 102 170 - -
Viun8g01247 316 Coils Coil 207 227 - -
Viun8g01247 316 CDD bZIP_plant_GBF1 150 201 IPR045314 GO:0003700|GO:0006355
Viun8g01247 316 SMART brlzneu 145 209 IPR004827 GO:0003700|GO:0006355
Viun8g01247 316 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 152 167 IPR004827 GO:0003700|GO:0006355
Viun8g01247 316 Gene3D - 148 204 - -
Viun8g01247 316 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 147 210 IPR004827 GO:0003700|GO:0006355
Viun8g01247 316 Pfam bZIP transcription factor 148 195 IPR004827 GO:0003700|GO:0006355
Viun8g01247 316 PANTHER BASIC LEUCINE ZIPPER 63 75 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01247 Viun-Chr8 17993609 17999027 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01247 93 316 bZIP Transcription Factor Family AT5G24800 50.000 5.89e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun8g01247 bZIP_1 6.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01247 K25784 - gmx:100776831 431.795