Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01237 ATGTCAATGGATCTAAAGAAATCTAACAAGATCAGAGAAATTGTTAGACTTCAACAGATCCTCAAGAAATGGAGAAGGCTAGCCAATTCTTCAAAAACCACTGCTACCACCAATGTGCCCACTTCCATAACCACCACCAGTAAGAGCATGAAGTTTCTGAAGAGAACCCTTTCCCTATCAGAACGTGAGGGAGGGTCAAGCAATGTTGTTCCCAAAGGGTACCTAGCTGTTTGTGTTGGTGAAGAGCTCAAGAGGTTCACTATACCAACTGAGTATTTGGGTCACCAAGCGTTTCAGATTCTTCTGAGAGAAGCAGAAGAAGAATTTGGGTTTCAACAAACAGGTGTGCTTAGGATTCCTTGTGAAGTTGCTGCTTTTCAGAGTATCTTGAAGATGGTGGAAAGTAAAGGGGACATGTTTTCCTCCCAAGAATGTAGACTCAGCATTGAAGAGATGCTGATGGGGTACTGCTCAGAAAACCAGATTGCATATTCTCACCATCCTCAAAGTCCATTATGCAGATAG 525 0.4267 MSMDLKKSNKIREIVRLQQILKKWRRLANSSKTTATTNVPTSITTTSKSMKFLKRTLSLSEREGGSSNVVPKGYLAVCVGEELKRFTIPTEYLGHQAFQILLREAEEEFGFQQTGVLRIPCEVAAFQSILKMVESKGDMFSSQECRLSIEEMLMGYCSENQIAYSHHPQSPLCR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01237 174 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 51 129 IPR003676 GO:0009733
Viun8g01237 174 Pfam Auxin responsive protein 23 133 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01237 Viun-Chr8 17640948 17641703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01237 3 174 Calmodulin-binding Proteins AT4G31320 51.546 2.04e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01237 K14488 - gmx:100779842 298.901