Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01234 ATGCAAAATGGTGAACAGGATGACCTAATATGCTTGGACGACATAACTTTACTTGATGAAGACTGTGGACTAGGCACATTCGATGCGGATAAAACGTCTGATAGTGCTCAAGTCATTAACAACACTGAGGAAGGTGTTGTGCCCACTACTGGAATGCGATTTAAAAGTGTAGAAAAGGTTAAGAGTTTTTACAAGCAACATGCTGTGAAATATGGTTTTGGTGTTCGAACTCGTACATCAAAAAAGGATGACAATAACCAGTTGTGTTACATGAAATTAGTTTGCTCAAGGGAAGGGAAGTATGTGTCCCAAATCCAGCCAGAATTGAAGACCCACCCAACCCAAAAAAGACAATGTTCAACATGCTTAACAACAGTAAACAAATCAGAAGCATGGATACTAAGCATTGTGGTTCATAATCACAATCATGACATTAGTCCAACCAAATCAAGGTTAATACGTGAAAATAGAAGATTGAATTTGCAGGCTCAGCGAACACTTGATATTAATGACGAGGTTGGTGTACGTTTGAACAAGACATTTAGGTCCTTGGTTGGTCAAGCAGGAGGATTTGTCAACTTACAGTTTCTTGAGCGAGACATAGGGAATTACATCGAGCAGCAAAGAAGAGCTTTTGGCAAGGAGGGAGATGGCCAGGCTTTGATTCAACATTTCTCAAGAATGAGAGAGTTGAATAATTCCTTCTATTATGAAATTGACACTGATGCTGAAAATATCATCATTGATGTGTTTTGGGCAGATGCAAGGAGTAGAGTTGCGTCAGTGGACTTTGGTGATGTCATATCATTCAACACTACATACCTCACCAACAAATACGACATGCCGTTCGCACCCTTCTTTGGTGTTAACCATCATAGCCACTCAATTCTACTTGGATGTGGGCTGGTCTTTGCAGAGGATGCATCAACTTTCACATGGCTCTCTCAATGCTGA 954 0.4046 MQNGEQDDLICLDDITLLDEDCGLGTFDADKTSDSAQVINNTEEGVVPTTGMRFKSVEKVKSFYKQHAVKYGFGVRTRTSKKDDNNQLCYMKLVCSREGKYVSQIQPELKTHPTQKRQCSTCLTTVNKSEAWILSIVVHNHNHDISPTKSRLIRENRRLNLQAQRTLDINDEVGVRLNKTFRSLVGQAGGFVNLQFLERDIGNYIEQQRRAFGKEGDGQALIQHFSRMRELNNSFYYEIDTDAENIIIDVFWADARSRVASVDFGDVISFNTTYLTNKYDMPFAPFFGVNHHSHSILLGCGLVFAEDASTFTWLSQC 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01234 317 PANTHER OS01G0519700 PROTEIN 41 314 - -
Viun8g01234 317 Pfam FAR1 DNA-binding domain 62 146 IPR004330 -
Viun8g01234 317 Pfam MULE transposase domain 267 316 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01234 Viun-Chr8 17493445 17494398 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun8g01234 FAR1 2.3e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01234 - - vun:114190181 394.43