Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01205 ATGAAGAAGCCAAAACGCCACTCGCCGACGGCCAACGCTGACCGGCGAGTGGACCCTGATTCCGGTGAGTTTGTCGCCAAGATGAAGAACGGTCGCCAGAGAAGGCTTAAAATCAGGCAAATGAAGATCCGCATCAGGAATGGCACCGCCGGCGTCTCTCCGCCTCCGGCCGAGGACCTGGAGGGAGGGAGCAGAGAGATTCATGAGCACGTGGAGATATCTTTGTCTTTGGCGGCGGCGTCGTCGTCCTCAGAGGAGGAGGAGCGGTCATCGTCGGAGCGAAACGACGGTGTTTTGTCGTACGGGTCCACGTCTGTGATTGGGAGCAGGAAGGAGATGGAGGACGCGGTGAGTGCGGAGATAGGGTTTGCTGCGAAGGAAAGAGGGAAGTACGACTTCTTCGCGGTGTACGACGGCCACGGCGGAGCGCAGGTGGCGGAGGCGTGTCGCGAGCGGTTGCACCGGCTGGTTGCGGAGGAGGTTGAGAGGAGTGAGAGTCACGTGGAATGGGACTGGCAGGGAGTTATGGAAGGGTGTTTCCGTAAAATGGACAGCGAAGTCGCTGGTAATGCGGCCGTCAGGACGGTGGGTTCCACGGCGGTTGTAGCTGTGATCGCGGCGGAGGAGCTTGTGGTCGCTAATTGCGGTGATTGTAGAGCTGTGTTGGGAAGAGGAGGTGAGGCCGTGGACTTGTCTAGTGATCATAAGCCCGATAGACCGGACGAGTTGATGCGAATCGAAGAGGCTGGTGGAAGAGTAATTAACTGGAACGGCCAGCGCGTGCTTGGTGTTCTTGCTACTTCAAGATCCATAGGAGATGAGTACCTTCGACCTTATGTAATATCGGAACCAGAAGTGACAGTGACGAAGCGAAGCAACAAGGATGAATTTGTGATACTAGCAAGTGATGGATTGTGGGATGTTATGTCGAGTGAAGTTGCGTGCCAAGTTGTAAGGAAATGCCTGAATGGACAGATTAGGAGAATGTGCAATGGAGTTGGGAAGCATGAAAACCGTGCCGCGGAGGCTGCAAGCCTCTTAGCTGAGATTGCATTGGCAAAGGGAAGTAGAGATAACACCAGTGTCATTGTAGTTGAGCTAAGAGGAACAGTAACATAA 1119 0.546 MKKPKRHSPTANADRRVDPDSGEFVAKMKNGRQRRLKIRQMKIRIRNGTAGVSPPPAEDLEGGSREIHEHVEISLSLAAASSSSEEEERSSSERNDGVLSYGSTSVIGSRKEMEDAVSAEIGFAAKERGKYDFFAVYDGHGGAQVAEACRERLHRLVAEEVERSESHVEWDWQGVMEGCFRKMDSEVAGNAAVRTVGSTAVVAVIAAEELVVANCGDCRAVLGRGGEAVDLSSDHKPDRPDELMRIEEAGGRVINWNGQRVLGVLATSRSIGDEYLRPYVISEPEVTVTKRSNKDEFVILASDGLWDVMSSEVACQVVRKCLNGQIRRMCNGVGKHENRAAEAASLLAEIALAKGSRDNTSVIVVELRGTVT 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01205 372 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Viun8g01205 372 SMART PP2C_4 90 365 IPR001932 -
Viun8g01205 372 SUPERFAMILY PP2C-like 96 368 IPR036457 -
Viun8g01205 372 MobiDBLite consensus disorder prediction 43 63 - -
Viun8g01205 372 FunFam Protein phosphatase 2C 51 93 372 - -
Viun8g01205 372 MobiDBLite consensus disorder prediction 7 24 - -
Viun8g01205 372 Gene3D - 92 370 IPR036457 -
Viun8g01205 372 MobiDBLite consensus disorder prediction 1 24 - -
Viun8g01205 372 Pfam Protein phosphatase 2C 101 360 IPR001932 -
Viun8g01205 372 PANTHER PROTEIN PHOSPHATASE 84 367 IPR015655 GO:0004722|GO:0006470
Viun8g01205 372 CDD PP2Cc 100 367 IPR001932 -
Viun8g01205 372 ProSiteProfiles PPM-type phosphatase domain profile. 100 367 IPR001932 -
Viun8g01205 372 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01205 Viun-Chr8 17017449 17019989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01205 101 368 PP2C-type Phosphatase Gene Family AT2G29380 52.797 1.52e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01205 K14497 - gmx:100807235 563.533