Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01204 ATGGGGAGAAAAGGTAGCAGCTGGTTCTCGTCCGTGAAGAAAGTTTTCAAGTCATCTTCTAAAGAATTGCCAGAGCCTGAGAAGAAGAAAGATAGCACACAGAAATTACAGCATGAAGTGGCAGAGGTGGTGTCTTTTGAGCATTTTCCAGTAGAGAGTTCTCCAGATAATAATGTGACAAATGAAGAGAGTGGCACTTCAACTCCATTTACAGAAGATAGAAGCCACGCCATTGCCGTTGCAGCAGCAACTGCCGCAGCTGCTGAAGCTGCTGTGGCGGCTGCTCAAGCAGCTGCAAGAGTGGTGAGACTGGCCGGTTATGGACGCCACTCAAAGGAAGAAAGAGCAGCAATACTCATTCAATCAAACTACAGAGGCTATCTAGCTCGACGTGCACTGCGAGCACTGAAGGGATTGGTGAGGCTGCAAGCACTGGTAAGGGGACACAACGTGAGAAAGCAAGCCCAAATGACGATGCGATGCATGCAAGCACTGGTGAGGGTGCAGGCCCGAGTAAGAGCTCGCCGACTCCAATTGAGTCACGTCGACGACGAAAGACAACAGTATGAGAAGATCGAAGAGCCCAAGCCCAAACCCATGCCCATGAGCCCCATGAGAAGGACACCCATCAATAATGATTGGGACAATAGGCGTCAAAGTACCTACAAAATTAAGGAAAACGATTTCAGGAAACATGAGGCTGCAATGAAGAGAGAGAGAGCTCTCGCATACGCTTTCAACTATCAACAGCAAGAGCAGCAAAAGCAATATTTGCTGGCTGAGTCGAAGGGTAAGGATGATATAGGAATAAAGGAAAAATGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCACAACCGTACAATGTGAGGAACATGGGACCACGTGAGACCTTTTACATGACTCCAGCTTCTACAACGTCAACAACCACAGATAACATGTCTGAGAAGACCGTAGAAATGGATATGATTGCAACTCCAGGCCCAACCAATGTTAGAAGCATCAGCCCCATAAACCCAGACTCCATTGATTCAAGCCCACTCTCCAATAGGCACAATCATCAAATACCTCCCAGCCCAAACAGACGCTACATGGCCCCAACTCAGTCTGCAAAGGCCAAGGTTCGGGTTCAAGGCCCATCGAAGCCTCGGGTTTCAGCTGGGCCTCAGTGGAACTCCTCAACTAAGGGAGGCTCCACCTGCGACTCGTCTAGTTCAGGTGGAGGAATCACCGCTTACCAAATTCCAAGAAGTCCAGGCCCAAAAATTAATGGCATTCGTTCACAGTCCAGAAGGACTGTTAGTAGCAGTCCAGATTACATTGAGGATTGGGCCCTTCCCCTTGGAGCCCATGGTTGGACTTAA 1365 0.4886 MGRKGSSWFSSVKKVFKSSSKELPEPEKKKDSTQKLQHEVAEVVSFEHFPVESSPDNNVTNEESGTSTPFTEDRSHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYGRHSKEERAAILIQSNYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLSHVDDERQQYEKIEEPKPKPMPMSPMRRTPINNDWDNRRQSTYKIKENDFRKHEAAMKRERALAYAFNYQQQEQQKQYLLAESKGKDDIGIKEKWGWNWLERWMSSQPYNVRNMGPRETFYMTPASTTSTTTDNMSEKTVEMDMIATPGPTNVRSISPINPDSIDSSPLSNRHNHQIPPSPNRRYMAPTQSAKAKVRVQGPSKPRVSAGPQWNSSTKGGSTCDSSSSGGGITAYQIPRSPGPKINGIRSQSRRTVSSSPDYIEDWALPLGAHGWT 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01204 454 MobiDBLite consensus disorder prediction 1 37 - -
Viun8g01204 454 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Viun8g01204 454 Pfam IQ calmodulin-binding motif 114 134 IPR000048 GO:0005515
Viun8g01204 454 MobiDBLite consensus disorder prediction 423 437 - -
Viun8g01204 454 MobiDBLite consensus disorder prediction 194 215 - -
Viun8g01204 454 MobiDBLite consensus disorder prediction 327 439 - -
Viun8g01204 454 MobiDBLite consensus disorder prediction 51 71 - -
Viun8g01204 454 MobiDBLite consensus disorder prediction 329 366 - -
Viun8g01204 454 MobiDBLite consensus disorder prediction 18 37 - -
Viun8g01204 454 MobiDBLite consensus disorder prediction 385 412 - -
Viun8g01204 454 SMART iq_5 112 134 IPR000048 GO:0005515
Viun8g01204 454 SMART iq_5 135 156 IPR000048 GO:0005515
Viun8g01204 454 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Viun8g01204 454 Gene3D - 110 164 - -
Viun8g01204 454 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Viun8g01204 454 Pfam Protein of unknown function (DUF4005) 347 390 IPR025064 -
Viun8g01204 454 PANTHER IQ-DOMAIN 5-RELATED 1 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01204 Viun-Chr8 16976064 16985857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01204 1 422 IQD Protein Family AT3G49260 50.000 1.40e-99 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01204 - - gmx:100798026 566.229