Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01189 ATGGAAAGTCTTTTTGTTGTGATACTTCCGTGTTCTAATGACCTCGTTCAAACTTCTTCTGCAATCTCAGAATATGATTTGCTAATAGAGGGAGATCTGTTCAAAGCACCTGAACCTATTCTTGAAGAACCAGCAATAGACCTCGATCCAGTGGAAGCAGCAATCTCAATGATATCTTGCGGGGAGGATGTCCCCTCACAGGGTCTAAAATCATCAGATATTAATATACTTCAAAATGAACAGCTTCTGAGTGAGGTATTCTACGAGTGCAAAAAAGATCTCTTAGAAAAGACAGTGATAGAGTCACCACTCACTGATATTATGGAAATCAAGGTTCCACCACTGAACATTGAGGATAACTCAATTGAAGGGAACAAACCACTTCCTCACATGACTCTACCAAAGAGTATCAGTTCAGGAAGTCTGAGTTCAATGGACTGGATGCATGGACCTGCAATGAAGCCAACTTTTCTGGATTTCCCAGGATTAGATTTCAATGCAGTTTATGGCATGCGGAGAGCATTTAGCGAAGGAGATATAAAGACTCTTAATACTGGCAACACAAGCTTTTGCCAATCTCCACAGGAGAGGCCTTTTCTTCTAGGAAACTGCACTAGTGAAGAACGTCAAGAAAAGCTCTCCAGATACAGAAACAAGAAGACAAAGAGAAATTTTGGGAGGAAAATTAAGTATGCTTGCAGGAAAGCTCTTGCTGATAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGACAGAAGAGTTAGATGTGAAGAGGTAA 777 0.4067 MESLFVVILPCSNDLVQTSSAISEYDLLIEGDLFKAPEPILEEPAIDLDPVEAAISMISCGEDVPSQGLKSSDINILQNEQLLSEVFYECKKDLLEKTVIESPLTDIMEIKVPPLNIEDNSIEGNKPLPHMTLPKSISSGSLSSMDWMHGPAMKPTFLDFPGLDFNAVYGMRRAFSEGDIKTLNTGNTSFCQSPQERPFLLGNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEELDVKR 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01189 258 Pfam CCT motif 209 251 IPR010402 GO:0005515
Viun8g01189 258 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 135 251 IPR045281 GO:0009909
Viun8g01189 258 ProSiteProfiles CCT domain profile. 209 251 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01189 Viun-Chr8 16688327 16692194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01189 205 255 C2C2-CO-like Transcription Factor Family AT5G57660 49.020 5.09e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun8g01189 CCT 1.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01189 - - aprc:113853022 405.986