Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01188 ATGTTTGCAGAGACCGAACTTCTCTTCCCATATTTTCGAAATTTCTCTCAAGAATTTCAACAACTTGAGGAGTACTGCATGACCCAAAAGTCCTGTGCTTCAATGAATGACCTCGTTCAAACTTCTTCTGCAATCTCAGAATATGATTTGCTAATAGAGGGAGATCTGTTCAAAGCACCTGAACCTATTCTTGAAGAACCAGCAATAGACCTCGATCCAGTGGAAGCAGCAATCTCAATGATATCTTGCGGGGAGGATGTCCCCTCACAGGGTCTAAAATCATCAGATATTAATATACTTCAAAATGAACAGCTTCTGAGTGAGGTATTCTACGAGTGCAAAAAAGATCTCTTAGAAAAGACAGTGATAGAGTCACCACTCACTGATATTATGGAAATCAAGGTTCCACCACTGAACATTGAGGATAACTCAATTGAAGGGAACAAACCACTTCCTCACATGACTCTACCAAAGAGTATCAGTTCAGGAAGTCTGAGTTCAATGGACTGGATGCATGGACCTGCAATGAAGCCAACTTTTCTGGATTTCCCAGGATTAGATTTCAATGCAGTTTATGGCATGCGGAGAGCATTTAGCGAAGGAGATATAAAGACTCTTAATACTGGCAACACAAGCTTTTGCCAATCTCCACAGGAGAGGCCTTTTCTTCTAGGAAACTGCACTAGTGAAGAACGTCAAGAAAAGCTCTCCAGATACAGAAACAAGAAGACAAAGAGAAATTTTGGGAGGAAAATTAAGTATGCTTGCAGGAAAGCTCTTGCTGATAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGACAGAAGAGTTAGATGTGAAGAGGTAA 846 0.4078 MFAETELLFPYFRNFSQEFQQLEEYCMTQKSCASMNDLVQTSSAISEYDLLIEGDLFKAPEPILEEPAIDLDPVEAAISMISCGEDVPSQGLKSSDINILQNEQLLSEVFYECKKDLLEKTVIESPLTDIMEIKVPPLNIEDNSIEGNKPLPHMTLPKSISSGSLSSMDWMHGPAMKPTFLDFPGLDFNAVYGMRRAFSEGDIKTLNTGNTSFCQSPQERPFLLGNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEELDVKR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01188 281 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 158 274 IPR045281 GO:0009909
Viun8g01188 281 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
Viun8g01188 281 Pfam CCT motif 232 274 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01188 Viun-Chr8 16688309 16692194 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01188 228 278 C2C2-CO-like Transcription Factor Family AT5G57660 49.020 9.25e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun8g01188 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01188 - - aprc:113853022 459.144