Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01172 ATGGCTTTCGATTTCATTTTCATTTTCGTCTCCGTGGCTTTCAATTTCTTCTTCGTCTTTCTGATTTCATCTATTTGGATTTCAATTTCAATTTCTTCTCATTGCTTTAATCATTCATGCCCTGGGAACTGTGGCTCGTGCCCTTGGAGGAAGATGTTCTCTCTTTCGATTTCATTGTTCTCCTTAAAATCAGGTTTTGAGAAACCTTCTGCCATTCAACAAAGGGGAATTGTTCCTTTCTGCAAGGTGCTTGATGTAATCCAGCAAGCACAATCTGGAATCGGAAAAACTGCTACATTTTGCTTTGGAGTTTTGCAGCAGCTTGATTACAACATAGTTCAGTGCCAGGTAAACATGTTGTAA 363 0.3912 MAFDFIFIFVSVAFNFFFVFLISSIWISISISSHCFNHSCPGNCGSCPWRKMFSLSISLFSLKSGFEKPSAIQQRGIVPFCKVLDVIQQAQSGIGKTATFCFGVLQQLDYNIVQCQVNML 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01172 120 PANTHER RNA HELICASE 55 113 - -
Viun8g01172 120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 116 IPR027417 -
Viun8g01172 120 Gene3D - 56 119 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01172 Viun-Chr8 16302071 16304819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01172 65 120 Eukaryotic Initiation Factors Gene Family AT3G13920 82.143 7.87e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01172 K03257 - vun:114194765 207.223