Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01150 ATGGCGAGAATCCTTGGAGGGAAGTATAAAATCGGTGAAAAAATTGGGAGCGGATCATTTGGTGAAATTTACATTGGGTCGCATATAGATACTTCTGAAATCGTAGCCATCAAAATGGAGAAGAGGAAAACAAATCAACCACAGCTCTTGTATGAGTCCAATTTATATAGTATTCTTCAAGGAGGAAGTGGAATTCCAAGAATGAAATGGTGTGGCACTGATGGGGACAATAATGTTCTTGTTATTGAACTTCTCGGACCAAGTCTTGAAGATCTCTTTTACTTCTGTGGGAATAAATTATCACTCAAAACAGTTTTAATGTTGGCTGATCAGATGCTTACACGGATAGAATATTTACACTCCAAAGGATTTTTGCATAGAGACATCAAACCTGATAACTTCCTTATGGGTCTTGGAAAGAAAGCAAATCAGATTTACATGATTGATTTTGGACTAGCAAAAAGATACAAGGATCCCATCACAAATAAGCATATCCCTTACAGAGAGAATAAAGGTTTAACAGGGACTGCACGTTATGCAAGTTACAATACTCACTCAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCTCTTGGCTATGTTTTAATGTACTTTTTAAGAGGAAGTCTTCCATGGCAAGGTTTGCAAGCAGCCACCAAAAGACAAAAGTATGATAAAATATGCAAAAAGAAGTTATCAACCCCCATTGAGGTGCTTTGCAAGTCATATCCTGTGGAGTTTGCTTCTTACTTTCATTATTGTCGCTCTTTGACATTTGATCAACGACCAGATTATGGTCTTTTGAGGCGTCTGTTTCGTAATTTGTTCACTCGTGCAGGATACGATTCTGACTATTTATTTGATTGGACTATTCTAAAATATCAACAGATGCAACAACAGAAGACACAAACTCAACCCATTGTCAGTAATTTCTTTCCTAGTTCAGCTCCCCTAGCTGTCCCTACTAGTCTTGAACCAGTGGAGGAGGATAATAATAAAGGAGTCAACGGTTCAACTCAACTTGATGTGGAAAGACCATCAATCAATGTTGATCATCAACGGATTGTGAACAATGGTTCATCTTTGCCCATTGCTATGCCCACACTCTCCACAGAAAATGTGTCAAAACCAGTAAGGCTTCGCCGAGTTTCATCAACACGACAATAG 1170 0.3863 MARILGGKYKIGEKIGSGSFGEIYIGSHIDTSEIVAIKMEKRKTNQPQLLYESNLYSILQGGSGIPRMKWCGTDGDNNVLVIELLGPSLEDLFYFCGNKLSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGKKANQIYMIDFGLAKRYKDPITNKHIPYRENKGLTGTARYASYNTHSGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAATKRQKYDKICKKKLSTPIEVLCKSYPVEFASYFHYCRSLTFDQRPDYGLLRRLFRNLFTRAGYDSDYLFDWTILKYQQMQQQKTQTQPIVSNFFPSSAPLAVPTSLEPVEEDNNKGVNGSTQLDVERPSINVDHQRIVNNGSSLPIAMPTLSTENVSKPVRLRRVSSTRQ 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01150 389 PANTHER CASEIN KINASE-RELATED 8 321 - -
Viun8g01150 389 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01150 389 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Viun8g01150 389 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01150 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Viun8g01150 389 FunFam CK1 family protein kinase 1 320 - -
Viun8g01150 389 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Viun8g01150 389 Gene3D Transferase(Phosphotransferase) domain 1 1 312 - -
Viun8g01150 389 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01150 Viun-Chr8 15565809 15593020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01150 2 236 Miscellaneous Gene Families AT3G23000 27.126 2.96e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Viun8g01150 Pkinase 2.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01150 K08960 - gmx:100782913 649.047