Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01126 ATGGGTTACATGGGTAGGTGTTGGTTGGTTGGGGTCATAATTGTGGTGGGCAGTGTTGGAGTGGAAGGGTATCCTGCTGAGGATTTGGTGGTTAAATTGCCTGGTCAACCTAATGTTGGCTTTAAGCAATTTGCTGGGTATGTTGACGTTGATGCCAAGCATGGAAGGAGCCTCTTCTATTATTTTGTGGAGGCTGAGCAAGACCCTGACAAGAAGCCCCTCACACTTTGGCTCAATGGAGGCCCTGGGTGTTCTTCCGTTGGAGGAGGTGCTTTTTCTGAATTGGGACCCTTTTATCCTAATGGTGATGGACTTGGTCTCCGAAGAAATTCCATGTCCTGGAATAAAGCATCCAATCTCATTTTTGTGGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACAACTTCTGATTACAAAACTGGAGATCTCTCCACTGCCAATGATATGTATTTGTTCATGTTGAAATGGTACAAGAAGTTTCCATCATACAGAACAAGAGAACTGTTCCTCACTGGAGAAAGCTATGCAGGACACTATGTACCTCAATTAGCTAATGTTCTCTTGGACCATAATGCTGGTTCAAGTGGTTTCAAATTCAACATCAAAGGAGTTGCTATTGGAAACCCACTTTTGAGACTTGATCGGGATGCACCAGCAACATATGAATACTTCTGGTCACATGGAATGATTTCTGATGAAGTTGGCCTTGCCATCATGAATGATTGTGATTTCGATGACTATTCCTATGAAACTCCTCACAACGTTTCTAATTCGTGCAACAATGCCATATATGAAGCAAATGTCATTGTTGGCAATTACATAAACAACTATGATGTGATTCTAGATGTTTGTTATCCATCCATAGCAGAACAGGAACTGAGATTGAAAAAGATGGCAACAAAAGTAAGTTTAGGTGTGGATGTGTGTATGACTCTAGAAAGACGGTTTTACTTCAATCTCCCAGAGGTTCAGAAGGCTCTTCATGCAAACCGTACAAACCTTCCTTATAGGTGGTCCATGTGTAGTAATTTTCTAAACTACAGTGACACTGATGGTAACATCAACATCCTTCCAATTCTCAAAAGAATAGTCCAAAACCATATCCCAGTATGGGTTTTCAGTGGAGATCAAGATTCTGTTGTGCCATTATTGGGATCTCGAACACTGATTCGTGAACTAGCTAATGAATTGCATTTCAAGATTACAGTCCCATATGGGGCCTGGTTCCACAAAGGGCAGGTTGGAGGTTGGGTGACTGAGTATGGAAATTTGTTAACTTTTGCAACTGTAAGGGGTGCTGCTCACATGGTACCTTATTCTCAACCTTCAAGAGCACTTCATCTATTCAGTTCATTTGTGCGTGGTAGAAGGTTGCCCAACACAACACATTCTTCCATTGATGATTGA 1413 0.419 MGYMGRCWLVGVIIVVGSVGVEGYPAEDLVVKLPGQPNVGFKQFAGYVDVDAKHGRSLFYYFVEAEQDPDKKPLTLWLNGGPGCSSVGGGAFSELGPFYPNGDGLGLRRNSMSWNKASNLIFVESPAGVGWSYSNTTSDYKTGDLSTANDMYLFMLKWYKKFPSYRTRELFLTGESYAGHYVPQLANVLLDHNAGSSGFKFNIKGVAIGNPLLRLDRDAPATYEYFWSHGMISDEVGLAIMNDCDFDDYSYETPHNVSNSCNNAIYEANVIVGNYINNYDVILDVCYPSIAEQELRLKKMATKVSLGVDVCMTLERRFYFNLPEVQKALHANRTNLPYRWSMCSNFLNYSDTDGNINILPILKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELANELHFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYSQPSRALHLFSSFVRGRRLPNTTHSSIDD 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01126 470 Gene3D - 311 347 - -
Viun8g01126 470 Gene3D alpha/beta hydrolase 25 287 IPR029058 -
Viun8g01126 470 SUPERFAMILY alpha/beta-Hydrolases 26 460 IPR029058 -
Viun8g01126 470 FunFam Carboxypeptidase 358 457 - -
Viun8g01126 470 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
Viun8g01126 470 FunFam Carboxypeptidase 24 288 - -
Viun8g01126 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 444 IPR001563 GO:0004185|GO:0006508
Viun8g01126 470 Pfam Serine carboxypeptidase 35 457 IPR001563 GO:0004185|GO:0006508
Viun8g01126 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Viun8g01126 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Viun8g01126 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Viun8g01126 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Viun8g01126 470 Gene3D - 358 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01126 Viun-Chr8 14409370 14414645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01126 317 460 Calmodulin-binding Proteins AT2G22960 25.694 2.85e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01126 K16297 - gmx:100801752 870.152