Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01108 ATGTCGTTTCAGGACTCAGACGAAACGACGTCCAAGGAGAGTGCGTTCGACGCGCCGGCGGCGTGGCGGCTCGTGATGGAGTTGCGTGGAGCCTTTGCTTCGGGCAAAACTCGCAGTTACGACTGGCGAGTGACGCAGCTCAAAGCGCTCGAGAAACTCGTCACCAATCACGAGCCGGAGATCGTCGACGCGCTCCGAAAAGACCTCGCGAAGCCGCCGCTGGAAACCGTCGCTTACGAGATTGCTATGTTGAAAAACTCATGTAAAGTTGCGCTCAAAGAATTGAAATATTGGATATCTCCCGAAAAGGTCAAAACATCACTCGCAGCTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCACTGGGGGTTGTGCTAGTCATCTCGGCATGGAACTACCCTTTTCTTTTGTCACTTGATCCAGTCATTGGAGCTATAGCAGCTGGTAATGCTGTGGTTTTAAAACCATCAGAAATTGCTCCAGCCACATCATCACTGATGGCAAAACTGCTGGGAGACTACATGGATAACTCATGTATTAGAGTTGTTGAGGGAGCAGTTGATGAAACATCCGCATTGCTAGAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGACGAGTGGCACGTGTTGTGATGGCTGCTGCTGCAAAACACCTTACACCGGTCGTGCTGGAGCTCGGAGGAAAATCTCCAGTTGTAGTCGATTCAAACATCAATTTAAAGGTAGCAACAAGACGAATAATTGCCGGAAAGTGGGGTTGTAATAATGGACAAGCCTGTATTTCTCCAGATTATATTATAACAACAAAAGAATATGCTCCCAAGTTGGTGGATGCGCTAAAGACTGAATTGGAGAAATTTTATGGGAAGAACCCATTGGAATCAGAAGATTTGTCTCGTATTGTGAACTCCAATCACTTCAATCGCTTGAAAAAGCTCTTGGATGATGATAAGGTTTCTGATAAGATTGTTCATGGAGGTGAAAAGGATGAAAGCAAATTGAAGATTAGCCCCACTCTTCTCTTGGATGTCCCACGGGATTCTTTGATTATGAGTGAGGAGATATTTGGTCCTTTACTTCCCATACTCACGGTAGACAAACTGGAAGAAAGCTTTGTTGTGATCAATTCAGGACCAAAGCCTCTCGCTGCATATATATTTACAAATAACAAGAAGCTCAAGGAGCTATTTGTTAGGAATATTTCAGCTGGCGGCTTGGTTGTTAATGACACTACATTACATCTTGCGGTTCATACTTTGCCATTTGGAGGAGTTGGTGAGAGTGGAGTGGGGGCATACCACGGGAAATTCTCCTTTGATGCATTTAGCCACAAAAAGGCAGTTCTGTATCGCAGTTTTATTGGTGATGCATCAGTTAGGTATCCACCATACACAAGTACAAAGCAAAGATTGCTAAAAGCTCTCATTGGTGGTGGCATACTTGGTATTATTCGTGCCCTGTTTGGTTTGTCCTAG 1482 0.4467 MSFQDSDETTSKESAFDAPAAWRLVMELRGAFASGKTRSYDWRVTQLKALEKLVTNHEPEIVDALRKDLAKPPLETVAYEIAMLKNSCKVALKELKYWISPEKVKTSLAAFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLMAKLLGDYMDNSCIRVVEGAVDETSALLEQKWDKIFYTGNGRVARVVMAAAAKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWGCNNGQACISPDYIITTKEYAPKLVDALKTELEKFYGKNPLESEDLSRIVNSNHFNRLKKLLDDDKVSDKIVHGGEKDESKLKISPTLLLDVPRDSLIMSEEIFGPLLPILTVDKLEESFVVINSGPKPLAAYIFTNNKKLKELFVRNISAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFIGDASVRYPPYTSTKQRLLKALIGGGILGIIRALFGLS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01108 493 SUPERFAMILY ALDH-like 28 461 IPR016161 GO:0016491
Viun8g01108 493 PANTHER ALDEHYDE DEHYDROGENASE 23 480 IPR012394 GO:0006081
Viun8g01108 493 FunFam Aldehyde dehydrogenase 29 233 - -
Viun8g01108 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 29 448 IPR016162 GO:0016491
Viun8g01108 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 230 430 IPR016163 GO:0016620
Viun8g01108 493 PIRSF ALDH 5 483 IPR012394 GO:0006081
Viun8g01108 493 FunFam Aldehyde dehydrogenase 230 430 - -
Viun8g01108 493 Pfam Aldehyde dehydrogenase family 30 450 IPR015590 GO:0016491
Viun8g01108 493 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 226 233 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01108 Viun-Chr8 13773964 13780115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01108 81 493 Aldehyde Dehydrogenase Gene Family AT1G44170 76.029 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01108 K00128 - gmx:100778722 823.928