Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01107 ATGGCGTCGAACACCAAGAACAAAGTGTTTGGTTCAGAAGAAGCTTCAGCGATGGTTGAGGAACTGAGAGCAGCGTTTGATTGTGGCAAGACACGTGGCTGCGAATGGAGAAGTTCCCAGTTGAAGGCTCTCATCAAGTTGAGTGAAGAACATGAGAAAGAGATTGTTCAAGCTCTTCACTCAGATCTCTCTAAGTCTGAAACTGAAGCCTTTGTGCAAGAGATTGCTATGTTGAAAAACTCATGTAAAGTTGCGCTCAAAGAATTGAAATATTGGATATCTCCCGAAAAGGTCAAAACATCACTCGCAGCTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCACTGGGGGTTGTGCTAGTCATCTCGGCATGGAACTACCCTTTTCTTTTGTCACTTGATCCAGTCATTGGAGCTATAGCAGCTGGTAATGCTGTGGTTTTAAAACCATCAGAAATTGCTCCAGCCACATCATCACTGATGGCAAAACTGCTGGGAGACTACATGGATAACTCATGTATTAGAGTTGTTGAGGGAGCAGTTGATGAAACATCCGCATTGCTAGAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGACGAGTGGCACGTGTTGTGATGGCTGCTGCTGCAAAACACCTTACACCGGTCGTGCTGGAGCTCGGAGGAAAATCTCCAGTTGTAGTCGATTCAAACATCAATTTAAAGGTAGCAACAAGACGAATAATTGCCGGAAAGTGGGGTTGTAATAATGGACAAGCCTGTATTTCTCCAGATTATATTATAACAACAAAAGAATATGCTCCCAAGTTGGTGGATGCGCTAAAGACTGAATTGGAGAAATTTTATGGGAAGAACCCATTGGAATCAGAAGATTTGTCTCGTATTGTGAACTCCAATCACTTCAATCGCTTGAAAAAGCTCTTGGATGATGATAAGGTTTCTGATAAGATTGTTCATGGAGGTGAAAAGGATGAAAGCAAATTGAAGATTAGCCCCACTCTTCTCTTGGATGTCCCACGGGATTCTTTGATTATGAGTGAGGAGATATTTGGTCCTTTACTTCCCATACTCACGGTAGACAAACTGGAAGAAAGCTTTGTTGTGATCAATTCAGGACCAAAGCCTCTCGCTGCATATATATTTACAAATAACAAGAAGCTCAAGGAGCTATTTGTTAGGAATATTTCAGCTGGCGGCTTGGTTGTTAATGACACTACATTACATCTTGCGGTTCATACTTTGCCATTTGGAGGAGTTGGTGAGAGTGGAGTGGGGGCATACCACGGGAAATTCTCCTTTGATGCATTTAGCCACAAAAAGGCAGTTCTGTATCGCAGTTTTATTGGTGATGCATCAGTTAGGTATCCACCATACACAAGTACAAAGCAAAGATTGCTAAAAGCTCTCATTGGTGGTGGCATACTTGGTATTATTCGTGCCCTGTTTGGTTTGTCCTAG 1464 0.4221 MASNTKNKVFGSEEASAMVEELRAAFDCGKTRGCEWRSSQLKALIKLSEEHEKEIVQALHSDLSKSETEAFVQEIAMLKNSCKVALKELKYWISPEKVKTSLAAFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLMAKLLGDYMDNSCIRVVEGAVDETSALLEQKWDKIFYTGNGRVARVVMAAAAKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWGCNNGQACISPDYIITTKEYAPKLVDALKTELEKFYGKNPLESEDLSRIVNSNHFNRLKKLLDDDKVSDKIVHGGEKDESKLKISPTLLLDVPRDSLIMSEEIFGPLLPILTVDKLEESFVVINSGPKPLAAYIFTNNKKLKELFVRNISAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFIGDASVRYPPYTSTKQRLLKALIGGGILGIIRALFGLS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01107 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Viun8g01107 487 FunFam Aldehyde dehydrogenase 224 424 - -
Viun8g01107 487 Pfam Aldehyde dehydrogenase family 11 444 IPR015590 GO:0016491
Viun8g01107 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 442 IPR016162 GO:0016491
Viun8g01107 487 PANTHER ALDEHYDE DEHYDROGENASE 14 474 IPR012394 GO:0006081
Viun8g01107 487 PIRSF ALDH 2 477 IPR012394 GO:0006081
Viun8g01107 487 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 220 227 IPR029510 GO:0016491
Viun8g01107 487 FunFam Aldehyde dehydrogenase 23 227 - -
Viun8g01107 487 SUPERFAMILY ALDH-like 14 455 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01107 Viun-Chr8 13773964 13792654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01107 71 487 Aldehyde Dehydrogenase Gene Family AT1G44170 75.238 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01107 K00128 - gmx:100816594 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01107 8 13773964 13792654 Viun8g01107 8 13773964 13792654 ECH