Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01092 ATGGCCGCCGCACCGCAACTTCACTTTCCCCCAGGATTCAGATTCCACCCCACAGACGAAGAACTCGTCCTTCATTACCTCTGCCGCAAATGCATCAACCAACAAATCGCCGTTCCCATAATCGCCGAAATCGACCTCTACAAATACGACCCTTGGGACCTCCCAGGAATGGCGTTGTACGGAGAGAAAGAGTGGTATTTCTTCTCGCCGAGGGACCGGAAGTACCCCAACGGTTCGCGCCCAAACCGCTCCGCGGGAACCGGGTACTGGAAAGCAACCGGAGCAGATAAACCGATTGGTAAACCGAAACCGGTTGGGATAAAAAAAGCGTTGGTGTTTTATTCTGGAAAAGCGCCCAAGGGAGAGAAGACAAACTGGATCATGCACGAGTATCGCCTCGCCGAGGTGGACCGTTCCGTTCGCAGAAAAAACAGCTTGAGGCTGGATGACTGGGTGCTGTGTCGCATATACAACAAGAAAGGCCCAGTTGAGAAGCAACCACCGGTCAAAATTGAGTGTTCCGAATTGGCGGAGGAGAAGCCGGCGATTGCGCCGCCGTACGCGGAGGCGACGGTGGTGGACTGTGTGAACTTCGAGGCGTCGGATTCGGTGCCTCGGCTGCTGACGACGGACTCGAGCGGCTCCGAGCAGGTGGTCTCGCCGGGGCCGGCGAGCGAGGTGCAGAGCGAGCCGAAGAGGAGCAACATTGAGTTTGAGTACAATTACGTGGATGCCACTCTGGCGTCGCAGTTCCATAGCGCGAATCAGATGTCGCCGCTGCAGGATATCTTCATGTACCTCTCGAAACCATTTTGA 816 0.5576 MAAAPQLHFPPGFRFHPTDEELVLHYLCRKCINQQIAVPIIAEIDLYKYDPWDLPGMALYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPIGKPKPVGIKKALVFYSGKAPKGEKTNWIMHEYRLAEVDRSVRRKNSLRLDDWVLCRIYNKKGPVEKQPPVKIECSELAEEKPAIAPPYAEATVVDCVNFEASDSVPRLLTTDSSGSEQVVSPGPASEVQSEPKRSNIEFEYNYVDATLASQFHSANQMSPLQDIFMYLSKPF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01092 271 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Viun8g01092 271 MobiDBLite consensus disorder prediction 207 231 - -
Viun8g01092 271 Pfam No apical meristem (NAM) protein 10 133 IPR003441 GO:0003677|GO:0006355
Viun8g01092 271 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Viun8g01092 271 FunFam NAC transcription factor 18 163 - -
Viun8g01092 271 PANTHER NAC TRANSCRIPTION FACTOR 56 9 201 - -
Viun8g01092 271 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01092 Viun-Chr8 13486162 13487724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01092 7 271 NAC Transcription Factor Family AT1G01720 69.930 6.34e-140 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun8g01092 NAM 3.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01092 - - pvu:PHAVU_001G072200g 487.263