Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01082 ATGTACGACACTATGTTGAAGCACGCTTCATTAAATGTTGCTTTCAGGCACGTCGTTCATGTTGTTCATATGATGGAGACAACACTTGATGATATTTCTCTTGAAGAATTGAATGATGGTGCCCAGTGTGTGGTGGACGACCAAATTGTTGACAATGACAACGATGTCGACCTTGTTCCGAGAGTTCACATGTGCTTCGAGACACTTGATGCAATTAAAAAATTTTACAGAGACTTTGCTGTTAGAACTGGATTTGGTATTAGAATAAGAAGTTCAAAGAAGGGAAAGGACAACGAACTTAAATATGTTAAACTTGTCTGTTGTCGTGAAGGTAATTATGTCTCCACCATACGTCCAGAGGTTAAGACACTACCTAGCCAGACCAAGCAATGTCAGGCTAGAATATCGGTTGGTAAAAAAGATGGGAAATGGCACATAAGAAGTGTTGTCATGGAGCACAGCCACAATATTAGTCCTATTGAATCAAGGCTGATATCAGGAAATCGAAAAGTTAATATTCATGTTAGGCAAACAGTTGACATAAACGACGAAGCTGGGGTCCGCATCAACAAGAGTTATCGTTCACTGGTGTGCGAAGCTGGAGGATATGAAAATGTTACTTTTATTGAGCGAGATGTTAGGAATTACATAGCTCATAAAAGAAGGCAATTATGCAAGGATGGGGATGGACAAGCTTTGCTTCGACACTTTTCCCACATGCGTCAAGTCAACAATGATTTCTTCTTTGAAATTGACATGGACGAAGACAATAGAATATCAAATGTTTTTTGGGCGGATTCAAGGAGCCGAGCGGCATGCGAGTATTTTGGTGATGTTGTATCGTTTGACACAACATATTTGACAAACAAGTACGACATGCCATTTGCACCGTTTGTTGGTGTTAATCACCACGGGCAATCAATTTTATTGGGGTGTGGTCTAGTATCTGTAGAGGACACATCAACATTTGTATGGTTGTTTAGGTGTTGGTTACGTTGCATGTCCAACAGGGCACCTGAAGGGATCATCACTGACCAGTGCAAAGCTATGCGCAATGCAATTCAAATTGTTTTCCCCAACACTAATCATAGATGGTGCCTTTGGCATATAATGAAAAAGGTTCCGGAAAAATTGCAGGGTTACACACAGTACAATGTTATCAAAAGTCAAATGAAGGCACTAGTGTATGACTCAAGTGGTGTTGACCAATTTGAGGTTGGTTGGAATGAATTCATCACAAATAACGGCCTTGTTAACAACGAGTGGCTTTGTTCGTTGTACGAGGACAGACATCTGTGGGTGCCTTGTTATTTGAGAAATAAATTTTGGGCTGGAATGTCAACAACACAACGAAGTGAAGGTATGAATGCATTTTTTGATGGGTTCATAAATTCCAGCACTTCATTGCAACAGTTCGTCGTCCAGTATGACAACGCACTTAGGCAAAAAGCAGAGAAGGAATTTGAGGCTGACTTCGCATCTGTTAACACCACAATTCCGTGTGGGTCGCAATCCCTAATTGAGAGGCAATTTCAGTTGCATTATACCCATGCTAAATTTGGTGAGATCCAGAATGAATTTAGAGCGAAGATGAATTGCTTTGTTATGAATGTTGTCAAAGATGGAAGCATTTGGAATTACAATGTTAAGGAAAACTTCTTATGGAATGGCAAGAGGGCCAACAAATTTCATGACGTGTTGTTTGACTCCATCACAACAACAATCAAATGTAGTTGTCTACTATTTGAGTTTCGTGGTATCTTATGTCGACACTGTTTCTTGGTCCTTGGGCAGGAAGACATTGATTGTGTCCCTGAACAGTACGTGCTAAGGAGGTGGTCCAAAAATGTTAGAAGACGACACACTTTGATGAAAGCAGCGTACAACCGAAGTTTGGATGATCCACAAATGCAAAGATTCCAGTCATTACGGAAGAGATTTAATGACATCAATGAGGTCGCATGTGAAACAGAAAGTGCTGCCCAATCGGTGTATGATCAGTTGAACACCATTGCAACTACATTAGGGTTACCAAATGAACCCAATCCCTTCAGATGTGGGGACGACCATCCAAGTGCTTGTCATGAGGATCACAGCTTACCCGACCATGTAATGTCTTCTGCACATCACAGCAATATTGTTCGAAGTCCCATTCACGTAAAAAGGAAAGGTAAACCACAGACAAATAGGTTGAAATCAACTGTGGAAAAGATAACAAAAAGGAAGAAAATAGTTGCGGCAAGAAACAAAGCATCTCGCAATTTAATGGTTTGTATCTTGCAGTATTGTGTGTTCCTTTATTGA 2304 0.4049 MYDTMLKHASLNVAFRHVVHVVHMMETTLDDISLEELNDGAQCVVDDQIVDNDNDVDLVPRVHMCFETLDAIKKFYRDFAVRTGFGIRIRSSKKGKDNELKYVKLVCCREGNYVSTIRPEVKTLPSQTKQCQARISVGKKDGKWHIRSVVMEHSHNISPIESRLISGNRKVNIHVRQTVDINDEAGVRINKSYRSLVCEAGGYENVTFIERDVRNYIAHKRRQLCKDGDGQALLRHFSHMRQVNNDFFFEIDMDEDNRISNVFWADSRSRAACEYFGDVVSFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLVSVEDTSTFVWLFRCWLRCMSNRAPEGIITDQCKAMRNAIQIVFPNTNHRWCLWHIMKKVPEKLQGYTQYNVIKSQMKALVYDSSGVDQFEVGWNEFITNNGLVNNEWLCSLYEDRHLWVPCYLRNKFWAGMSTTQRSEGMNAFFDGFINSSTSLQQFVVQYDNALRQKAEKEFEADFASVNTTIPCGSQSLIERQFQLHYTHAKFGEIQNEFRAKMNCFVMNVVKDGSIWNYNVKENFLWNGKRANKFHDVLFDSITTTIKCSCLLFEFRGILCRHCFLVLGQEDIDCVPEQYVLRRWSKNVRRRHTLMKAAYNRSLDDPQMQRFQSLRKRFNDINEVACETESAAQSVYDQLNTIATTLGLPNEPNPFRCGDDHPSACHEDHSLPDHVMSSAHHSNIVRSPIHVKRKGKPQTNRLKSTVEKITKRKKIVAARNKASRNLMVCILQYCVFLY 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01082 767 Pfam MULE transposase domain 279 373 IPR018289 -
Viun8g01082 767 SMART 26again6 575 602 IPR006564 GO:0008270
Viun8g01082 767 ProSiteProfiles Zinc finger SWIM-type profile. 564 600 IPR007527 GO:0008270
Viun8g01082 767 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 49 671 IPR031052 GO:0006355
Viun8g01082 767 Pfam SWIM zinc finger 573 592 IPR007527 GO:0008270
Viun8g01082 767 Pfam FAR1 DNA-binding domain 74 158 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01082 Viun-Chr8 13268539 13270842 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun8g01082 MULE 7.6e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01082 - - vun:114180824 1014.22