Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01044 ATGGGAAGTGTGTTGCTCCTCCAACGTGATTCTGTATTGATGAAGCTATTACTAATGCTTATTCTTATCAGAAGTGGCAGCGCTCATAACGAGTGCCATGAGAATTTGTCTTGTGGCCCGGACGAACCCCTTATCGAATTTCCCTTCGAACTGGTGAAGGAGATGGAGGAGCCATGCACTTATCCCCGACTTTGTCTTTCTTGTACTGAAAAAGGACAGACCATGCTTCTGCTTCCAACGGTCAAACTCCAAGTCGTTTACATAAACTACGAAGCTCAGCAAATTATCTTAACTGACCCGGAAAAGTGCTATTCCAACAAGTTTAGGCAAATCATCAACTTTGTTCAGAGTTACCAATTTTATGAACTGCACAGTAACTTGAGCTTCTTCAACTGTACTTCAGCTGGGCCTCCACACCTCAGAGACAGCTTCGGGGAAGACTCATATTCCCAAGATTCGGTCTCCTGTCCGATTTTCATTTCTCAATCTTATAATAGTGTCCTCCAATTGAATCTAACATCCTGTACCAAGATGTTCGACATCCCTTCTCCAATCAGGTTCAGAGACGGGGATGACTTGTTTTTGAGCTGGCTCAAACCAAATTGTTCTGAGTGCAAAGAAAAAGGCAAGGGATGTAAATGGAAGACCAACAACGATACAGAAGGAGACATCGAATGCTTTGAATGCACACGGAAAACAATTCACGTTCCTAAATCTCTTATTTTTGCTACTACAGGTTCCATCTTTTTGGGGCTGCTGGTCATTGCTGTCTTTAAGAGCTTCTTCTATTTTAGGAGAAAGCAAGAAGACCAAGCAAGAGTGGACAAGTTTTTAGAGGACTACAGGGCAGAAAAGCCTGCAAGATTCACCTACGCTGACCTTAAAAGAATCACCAATGGCTTTAAGGAAAACTTAGGAGAAGGAGCTCATGGGGCTGTGTTCAGAGGAAAACTTTCCAGTGAGATTCCAGTGGCTGTGAAGATCCTCAACATAACAGAGGGAGAGGGGAAAGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATCCATCACATCAACGTGGTGCGTTTGCTTGGCTTCTGTGCAGAAGGATTCCATCGTGCTCTTGTCTACAGTTTCTTTCCAAACGGTTCCTTACAGAGCTTCATATTTCCACCAGAAGACAAGGACCATTTCCTTGGTTGGGAGAAGCTTCAACACATTGCTCTCGGTATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGCAATCATCCCATTATCCACTTTGACATCAATCCGCACAACGTGTTACTTGATGACAACTTCACTCCAAAAATATCTGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCCGAGTGTGGTGTCAATGACAGCTGCTAGGGGAACCTTGGGATACATGGCACCTGAAGTCTTCTCCAGAAACTTTGGAAACGTGTCTTACAAGTCTGATATTTACAGTTATGGAATGTTGTTGTTAGAAATGGTTGGTGGGAGAAAGAATGTAGACATGTCTTCTGAAGAAGATTTCCATGTTATGTACCCGGATTGGATCCATAACCTGGTTGATGGAGATGTGAATATCCATGTTGAGGATGAAGATGATGTTAAGATTGCAAAGAAACTGGGGATTATTGGGCTTTGGTGCATTCAGTGGCAGCCAGGGAACCGTCCATCCATAAAATCTGTGATACACATGCTAGAAACTCAAGACGAAAACCAGATTGCTGTGCCTCCTAATCCATTTCACTCAGCAACTTCCACTACAGTCAAGGGACCCACTTCGACAAGACCACCTTTGCATTTGGAAGTGATTGAAGAATGA 1827 0.4308 MGSVLLLQRDSVLMKLLLMLILIRSGSAHNECHENLSCGPDEPLIEFPFELVKEMEEPCTYPRLCLSCTEKGQTMLLLPTVKLQVVYINYEAQQIILTDPEKCYSNKFRQIINFVQSYQFYELHSNLSFFNCTSAGPPHLRDSFGEDSYSQDSVSCPIFISQSYNSVLQLNLTSCTKMFDIPSPIRFRDGDDLFLSWLKPNCSECKEKGKGCKWKTNNDTEGDIECFECTRKTIHVPKSLIFATTGSIFLGLLVIAVFKSFFYFRRKQEDQARVDKFLEDYRAEKPARFTYADLKRITNGFKENLGEGAHGAVFRGKLSSEIPVAVKILNITEGEGKEFINEVGIMGKIHHINVVRLLGFCAEGFHRALVYSFFPNGSLQSFIFPPEDKDHFLGWEKLQHIALGIAKGIEYLHQGCNHPIIHFDINPHNVLLDDNFTPKISDFGLAKLCSKNPSVVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSEEDFHVMYPDWIHNLVDGDVNIHVEDEDDVKIAKKLGIIGLWCIQWQPGNRPSIKSVIHMLETQDENQIAVPPNPFHSATSTTVKGPTSTRPPLHLEVIEE 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01044 608 PANTHER RUST RESISTANCE KINASE LR10-RELATED 271 586 IPR045874 GO:0004672
Viun8g01044 608 Gene3D Transferase(Phosphotransferase) domain 1 374 581 - -
Viun8g01044 608 MobiDBLite consensus disorder prediction 577 596 - -
Viun8g01044 608 Gene3D Phosphorylase Kinase; domain 1 272 373 - -
Viun8g01044 608 SUPERFAMILY Protein kinase-like (PK-like) 283 571 IPR011009 -
Viun8g01044 608 MobiDBLite consensus disorder prediction 577 600 - -
Viun8g01044 608 Pfam Protein tyrosine and serine/threonine kinase 301 567 IPR001245 GO:0004672|GO:0006468
Viun8g01044 608 FunFam PR5-like receptor kinase 374 579 - -
Viun8g01044 608 Pfam Wall-associated receptor kinase galacturonan-binding 32 99 IPR025287 GO:0030247
Viun8g01044 608 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Viun8g01044 608 ProSiteProfiles Protein kinase domain profile. 299 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01044 608 FunFam serine/threonine-protein kinase PBS1-like 266 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01044 Viun-Chr8 12364952 12367364 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01044 29 597 Receptor kinase-like Gene Family AT1G66910 32.653 9.99e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun8g01044 PK_Tyr_Ser-Thr 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01044 - - gmx:102662104 878.241