Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01036 ATGGAGCAGCCATGCACTTATCCCCGTCTTTGTTTTTCTTGTACTGAAAAAACTCAGACCATGCTTCTGCTTCCTACCATCAAACTCCAAGTCGTTTACATAAACTACCAATTTCAGGAAATTTTCTTTTCTGACCCGGAAAACTGCTTTTCCAACAAGTTTATGCAAATCATCAACTTTGTTCAGAGTTACCAATTTGAATCACCACCATTTGATGAACCGCACGGTAACTTGAGCTTCTTCAACTGTACTTCAGCTAGGCATCCCATAAAGCGCTACCCCGGAGACTCATATTCCCAAGACACGGTCTCCTGTCCGATTTTCATTTCTAATCCTTATGATAGTGTCCTGGAAATGGATATAACATCCTGTACCAAGATGTTCCACATCCCTTCGCCAATCCGTTTCCCCGAGTCTAAATACTTGCGTTTGATATGGCCCAAACCAAATTGTTCTGAGTGCGAAGAAAAAGGCAAGAGATGTAAATGGAAGTCCAACAACAACGACACAGAAGGAGATATCGAATGTTTTGAATGCACACGGAAAATAATTCACGTTCCTAAATCTCTTATTTTTGCTATTTCAGGTTCCATCTTTTTGGGGCTGCTGGTCATTGCTGTCTTTAAGGGCATTCTCTATTTTAGGAAAAAGCAAGAAGACCAAGAAAGGGTGGACAAGTTCTTAGAGGATTACAGAGCAGAAAAGCCTGCAAGATTCACCTATGCTGACCTTAAAAGAATCACCAATGGCTTTAAGGAAAACCTCGGAGAAGGAGCTCATGGGGCTGTCTTCAGAGGAAAACTTTCCAGTGAGATTCAAGTGGCTGTGAAGATCCTCAACAATACAGATGTTGAAGGGAAAGAGTTCATCAATGAAGTGGGCATTATGGGCAAAATCCATCACATCAACGTGGTGCGTTTGCTTGGCTTCTGTGCAGAAGGATTCCATCGTGCTCTTGTCTACAATTTCTTTCCAAACGGTTCCTTACAGAGCTTCATATTTCCACCAGAAGACCAGGACCATTTCCTTGGCTGGGAGACGCTTCAACACATTGCTCTCGGTATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGCAACCATCCAATTATTCACTTTGACATCAATCCTCACAATGTGTTACTTGACGACAACTTCACTCCAAAAATATCTGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCCCAGCGTGGTGTCTATGACAGCTGCTAGGGGAACCTTGGGATACATTGCACCCGAAGTCTTCTCCAGAAACTTTGGGAACGTGTCTTACAAATCTGATATTTACAGTTATGGAATGTTGTTGTTAGAAATGGTTGGAGGGAGGAAGAATGTGGACATGTCTTCTCCAGAAGATTTCAATGTTTTATACCCGGATTGGATCCATAACCTGGTTGATGGAGATATGCATATCCATGTTGAGGATGAAGGTGATGTTAAGATTGCAAAGAAACTAGCAATTATTGGGCTTTGGTGCATTCAGTGGCAGCCAGGGAATCGTCCATCCATAAAATCTGTGATACACATGCTAGAAACTCAAGAGGAAAACCAGATTGCTGTGCCTCCTAATCCATTTCACTCAGCAACTTCCACTACAGTTAAGGGACCCACCTCCACAAGACGACCTTTGCATTTGGAAGTGATTGAAGAATGA 1677 0.4222 MEQPCTYPRLCFSCTEKTQTMLLLPTIKLQVVYINYQFQEIFFSDPENCFSNKFMQIINFVQSYQFESPPFDEPHGNLSFFNCTSARHPIKRYPGDSYSQDTVSCPIFISNPYDSVLEMDITSCTKMFHIPSPIRFPESKYLRLIWPKPNCSECEEKGKRCKWKSNNNDTEGDIECFECTRKIIHVPKSLIFAISGSIFLGLLVIAVFKGILYFRKKQEDQERVDKFLEDYRAEKPARFTYADLKRITNGFKENLGEGAHGAVFRGKLSSEIQVAVKILNNTDVEGKEFINEVGIMGKIHHINVVRLLGFCAEGFHRALVYNFFPNGSLQSFIFPPEDQDHFLGWETLQHIALGIAKGIEYLHQGCNHPIIHFDINPHNVLLDDNFTPKISDFGLAKLCSKNPSVVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSPEDFNVLYPDWIHNLVDGDMHIHVEDEGDVKIAKKLAIIGLWCIQWQPGNRPSIKSVIHMLETQEENQIAVPPNPFHSATSTTVKGPTSTRRPLHLEVIEE 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01036 558 MobiDBLite consensus disorder prediction 529 546 - -
Viun8g01036 558 PANTHER RUST RESISTANCE KINASE LR10-RELATED 221 536 IPR045874 GO:0004672
Viun8g01036 558 MobiDBLite consensus disorder prediction 529 549 - -
Viun8g01036 558 ProSiteProfiles Protein kinase domain profile. 249 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01036 558 FunFam serine/threonine-protein kinase PBS1-like 215 323 - -
Viun8g01036 558 SUPERFAMILY Protein kinase-like (PK-like) 231 521 IPR011009 -
Viun8g01036 558 ProSitePatterns Protein kinases ATP-binding region signature. 255 277 IPR017441 GO:0005524
Viun8g01036 558 Gene3D Transferase(Phosphotransferase) domain 1 324 531 - -
Viun8g01036 558 FunFam PR5-like receptor kinase 324 529 - -
Viun8g01036 558 Gene3D Phosphorylase Kinase; domain 1 221 323 - -
Viun8g01036 558 Pfam Protein tyrosine and serine/threonine kinase 251 518 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01036 Viun-Chr8 12128029 12130173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01036 194 533 Receptor kinase-like Gene Family AT4G18250 42.165 3.22e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun8g01036 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01036 - - gmx:100813645 827.78