Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01032 ATGCAGCTATATCATCATCCGTTGGATTTGGACAGCCAGAGGGTGAGAATTTCATTGGAGGAGGAGGGTGTGGATTATACATCTCACCATGTCAATCCCATTACTGGCAAGAACTTGGATTCTTCTTTCTTCAAGATGAATCGCCGTGGAAGGGTCCCGGTTTTCCAAAATGGTTCTCATATCATTTACAACACTATTGATATAATCCAGTACATCGAAAGAATTGCTGTGGTTTCCTCAGGGGCTGACAGTATCAGTACCAGTAACAGGGAAGTGATTGAATGGATGCAGAGGATACAAGACTGGGACCCCAAGTTTTTCACACTTGCACATATACCTGAGAAATACCGTGTTTATGTTTCCAAGTTCATAAGGCAAGTGGTGATTGCTCGCATGTCTGAGTCACCTGAATTAGCAGGAGATTACCATAGGAAGTTGAGAGAAGCCTATGAGACCGAAGAGAAATTGAAAGAAGCAGACGTTTTGAGAAGGAGCAAAGAGCATTTGGTTAGATTGCTTGATGAGGTGGAGAGGCAACTGTGTGAAACACCTTTTTTGGCAGGTCAAGATTTTACCATGGCTGATGTGATGCTCATTCCAGTATTAGCTCGTTTAAAACTCTTGGATTTAGAGAATGACTACATAACTGGAAGGCCAAACATTGCTGAGTATTGGCTTTTGGTTCAGCAAAGGCCTAGTTATAAAAGGGTGATTGGTAAGTACTTCAATGGTTGGAGAAAGCACAAAACACTCTTGAAAACATGGTTCTTGGTTCGTATTCGAAGTTTGCTGAAGAGGTACTAG 804 0.4204 MQLYHHPLDLDSQRVRISLEEEGVDYTSHHVNPITGKNLDSSFFKMNRRGRVPVFQNGSHIIYNTIDIIQYIERIAVVSSGADSISTSNREVIEWMQRIQDWDPKFFTLAHIPEKYRVYVSKFIRQVVIARMSESPELAGDYHRKLREAYETEEKLKEADVLRRSKEHLVRLLDEVERQLCETPFLAGQDFTMADVMLIPVLARLKLLDLENDYITGRPNIAEYWLLVQQRPSYKRVIGKYFNGWRKHKTLLKTWFLVRIRSLLKRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01032 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Viun8g01032 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Viun8g01032 267 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Viun8g01032 267 SFLD Glutathione Transferase (cytosolic) 1 231 IPR040079 -
Viun8g01032 267 CDD GST_N_family 1 73 - -
Viun8g01032 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 251 IPR010987 -
Viun8g01032 267 Gene3D Glutaredoxin 1 75 - -
Viun8g01032 267 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Viun8g01032 267 Gene3D - 125 238 - -
Viun8g01032 267 Coils Coil 159 179 - -
Viun8g01032 267 SFLD Main (cytGST) 1 231 - -
Viun8g01032 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Viun8g01032 267 CDD GST_C_family 147 225 - -
Viun8g01032 267 SUPERFAMILY GST C-terminal domain-like 157 241 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01032 Viun-Chr8 12067340 12070060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01032 1 267 Glutathione S-transferase Gene Family AT1G77290 68.165 2.30e-140 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01032 K22077 - gmx:100808461 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01032 8 12067340 12070060 Viun8g01032 8 12067340 12070060 ECH
Viun8g01032 8 12067340 12070060 Viun9g02329 9 32832845 32836116 PCT