Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01024 ATGGATCAACACCACTTCCTCCACCACCACTACCACCACCCTCAGGACCACCGCACCACCCGCTACACTTCCCTTAACCCTCAATCGCATCACCACCACCACCACCATAGCAACCTCCCACCGCCGCCGCCAGCGCCGCCGCCGCCTCTCTCCTACCACCGCACCCTCCACGCGGCTCCCCTGTCGCAACCCTACACCCCTTCCACTCCCCAACCCCAACAGCAGCAGCAGCAGCAATTCTCTTTCAACCACCACACATCTCTCCCCCACCGCACCCTCGAAGACGATTCACGTTCTCTCACCTACGACCTCCTTCCTCGCCGCACCACCGCCATCCCCTGGAACCCTAACCCTAGAACTGATGATTTCGATCGCGAATTCCACCACCACCACCACCGCCCTCCCCCGCCGCCGCCTCCCCCGATCGAAACCCTCCGCTATGACCCTGGGCGCCGTGACCGCCTCGTGGTGGATGCCTACGAGCAAAACCCCAGGGAGGCGCTCGCGTGGGGCGGCGGTGACTACCACGCGCCTAGCCAGGGCGACGTAGAGCCAGCACCCTACGTGCGCGTGTACAGCGTGGAATGTGACACTGACGTGGCCGGTAGAGGGTCCCGGGTGGAGAGCAAGAGGTGGGTGATGAGTGATAGAGAGAGGGAGAGGGAGAGGGGAAGAGAGTTGCACGAGTCTTCTTCTAATTTAGTTAGCAAGGGTAGTAACAGTGACAAATATTATCATGGTTCTGATAATGTGGATAGGTATAGTAGAGGGAATAGTAGAGAGCGTGGTCATGAATTCGCACGTACTCCTCCTAAGAAACAGGTGCAGAAGAAGAGCGCGCTTCTTAGGATTCAGACTGTTAAACCTAATCATAGGAACCGTGAGGTTGAGCAGTTACGGTACCCCGGTTATGGACCTGAAGGTAGCAATGGCTTTTTCAGGGGAAAGGAGCCATATTTGGCTCATGGGGTGAAGGGGGAAGAGAGAGAAGGGAGCCCTGTTGAGATTGATATCTCGTTTGAGTCCAATTCTCTGGTGGCCAAGGCTATTGTTGCGCCGCCTTCGAGTTCAGTGTCTGTTCCTGATTTGAATGTGACGCCGGTTTTAGATTCGGATTTGGGTTCTGGGGAGAAGAATAAAAGGGTTTCGGGCTCTGATGGCTATTACTCTGGTTTGCAGCAGCCGTATAGAATGTCTTCCGTTGTGGTTGTGGATTTAAATAGGTCGCCTTGCAAAGGGAATGATAGGTCTGGTTTGAGGAAGGAGGTTAATGTGCGGAAGAGTGTTAAGAATAGTTCTTCTCGGTCTCGCACCAGGGAGGCTGATGATTCTCGTGGGAAAAATGCGGTGCCAAATTCAGTTAAAGCTGGCAATGTCTGTTCTGGTAAATCGACCATAACGGTTGTCAAGAAGAAGAGAATTGTTAAGAGAATGGTGAAGAGGAAAGCTTGTTTAAACTCTATGACATCTGTGCCGAATTCACTGCCGGCAGAAAGGCTTCCTGGAACCGTGGAAGTCGAGAGTGCTGCACTGGTTTCGTCAACGGCCTCTAATCCTGAGAAAATTGAAGCTAATTCAGATGAGAAAAGCAACATCGTTGAGGAAGTGCCAGACTGTTTACATTCTTTGCCAAAGGAAGGTAATGTATTGAAAGAAGATAAAGAGGGAGGTTTACCGCAGCTGAGTTTGGGGCCAGATTCCACATCGCAAGATTGTGAGAGTGACAAAGATTCTGATAATAGGGAAGTATCCAGGTTTGAAATTGAAAGAGATGGAAACATTTCAAAATTTCCATCTCGTGCTTCTAGTAGTGAAGATAAGAAGAGTGATTCAGGTTGTTTAGATGTTAATAATGATGTCTTTGATAATGGAAATATTATTTTTATGCATGATAATGCAAATACTTCCGATTGTTTAGGTGCAAATAATTCTGTTCCAGGTACTGACACGGTTACTGAATTCTTAAGTGGGAGTACTATTTCTGAAGTCAATCACATGGATTATGGTAATAAGCAATTAAGTCAGAATGAAGGGTCTCTATCAGTTGGGAATTATTCAAATGTACAATCCCCACTGAATAACAATCTTGTAGATGCAGGGGATGAAATATTAAAAACCAGCGATACTTTTTCGAGTTCAAGAAAAATTAGGATTCAAGATGGTCTAGATTGCCTACAACATTCCAGTGCACTGAAGCAAGGCTCTGATAATGGATCATCTAATTTAGAAGATTGTATTGTTCACGGCTCTGGTATCATGCATGATGCTGGGAACCAATTGGCCCATGGTGATGTCACCATGCACCCTGAGAATTGTGAGACAGAAAAAACATTCCCAGATTCTAATATTTTAGCTGGATCTGGTGAAGGGAACACAAAGAAGATAAAAAAGAGAAAAGCTAGAACACAATTAAATATTTTGAGTTCAGAGATGGAGTCCTTATCTCCAGATCATGTAAATCCTGTTAGCCTTGCTAATAATGTGGATGGAGGCACGGGTCTAATGTCGAAAGATCCATCTGCTTCTATAGTTTTAGATCAGTCTGTTCAAAACGATGTTGACTCAATAACTGGTTTGGATGGGGTTACTGCTTTACATGAGGAAGGGGAGTTTTTAGAGACTCAGTTTTATGCTGCAAATAACAACAATGATGATGCAAATGAGGTTTCACCATCTTCTAAAAGGAAAAAAGTCACAGCTAACCCAAATTTCACTCAATGTCAATCAGAAATCAGTGCTGTTATTGTGGTTACCACCACATCTGATGTGGAAACTCCAGTCAATCTCAATGATAACCAAGAACATCAGAAAGAATTTGCTTTGTCAAGCATGGGTATGTGCATACCGTCTTCTGTTCAGTCAATGCCTTATTCAGAGAGTATTACCAAAATGTCTGACAATATTTTTAGTGGAGGATCTTTTGACTCTACTGATGCAAATAGGGAAACCATGAGTTCCGAGTATTCGGAATTACAACACTCAGACATAGTCTCTTTTTCACCATGTGAGGACTTGGCATTTCAAAACGATCACTTCTCACCATTGGAAGGTGAGTGCAAAGAAAACATTACTCCGGTTGTGCTTGTGAGTAATACTCAAATTGGTGTTTTAGGTGTTGGAAATACATTGGGAGAAAAGACTGATTTACAGGCCGTTAAGGGAAATTATCAATATAGAGACTTTGTGCAAAGGTCACCAAGACCTGACATGGAACCTAATGATCTCAATGTTAAGAATGATTTGCTTGCTCAGCAGAACCTTATGTCCTGTCCAACTAGTGGTGATGAAGTCACTACAAGTAATTCGAATGACGAATTCATTGTGGATGCACCTGGCGCATTATCAGATATCTTTTCTCAAGGGATGGCATCTGAAGTACCGGATAGAAGGTCTTTAGAATTCACAGCTATCAATGATGAAAATATTTGTGGGGTTGAAGAAAATACTTCGTCGGTACATCAGACGATACAGAATAGTAGGTCAGATAGTGCATTTGGACACAGTAATATGATAACAAAGAAAACAATTTCAGAACCATCCCAAGTTTCTTCCAAAGTTACAACTCAGGCTCTAAATTCATATCGTTTTGGGTTGAGTGGGACCAAAAATCAGTCAGGTAGTGTCATTCCCAAAACTTTTCCAGGTCATTCTTTTACCTTTTTGAAGTCGGAGACGAAGACATCTGCCTCTTCAACTCATGTGTCAAAGCCTCGAACTTGGCATCGGACAGGTAATAATCCCCCTATTTCTGTACCTAGAATCAATTCAGTAAGAACAGTTCCTCCCAAAAGGCCAATTCTGGAAAGGAAAGGGAACTTTCAAAATACCTCGTATGTTCGTAAAGGAAACAGTCTTGTAAGGAAACCTACCCCAGTTCCTGCTCTACCTCAAATCTCCTCTGTTAATAAGTCATCTTCTTCGGGCTTTGGTGAAATATCAAAAAGCACTAAATCTGAAAGCAGGGCTGACGTGACAGATCAACCAATGTACCTGAGAGCAGGAGCAACATATTCTCAGCAGAGGCAGAGGCAGAGAACACCTCCACTACCAATTGACACCAAATCAGAGGAAAATACATCTTCCTCATTGGTAGAACCTTCTGGTGGTTCCTGTGAAAATGTATCTGATCCTAAAACATTTATAGAAATTAATAATAATGCACAGAACTCTTCTGAAGATGCACTGAAGCATTGTGAAATTCTAGAAAACCAACCTGTTCCATCCGATAATGGGGAGAGTCAAGTTGAAGTAAACGAAGGCAATCCTCTTTCTTTGAATACGAAGAGAATAGTATATATAAAGCCCAAAACAAATCAATTGGTTGCAACATCAAATTCGTGTGATGTGTCTGTCTCCACTGATGACAATGGCCAAACTGCCTTCTCTGATGGCTACTACAAGAGAAGAAAAAATCAATTGGTTAGGACTACATTTGAAAGCCACACCAACCAAACTGCTGTAGTGCCTAATGGCATGGCAAATTCTGATGGACAAGGAACTAGTAATGCTCTTTGCAATACGAGGTTTAGTAAGAAGCGGTTACATAAGGCTGTCAGGAGTTCATGCAAACGTTCAAGAGCCTCACTAGTGTGGACACTCTGTAGCAAAAATTCTTCTGAACATGACAGGAATTCACGTCATAATCAAAAGGTTTTACCTCAATTGTTTCGATGGAAAAGAGCAACATTTGCTTCAAGCTTCAACAGCAGTTCCGTATCTGCAATCAGCAAAAAATTGCTTCAATTGAGAAAGAGGGATACTGTTTACACTAGGTCAAAACATGGGTTTTCACTTTGGAAATCCAGGGTTTTAGGTGTTGGTGGTTGCAGTTTGAAATGGTCCAAATCCATTGAGAAGAACTCAAAGCAAGCTAATGAGGAAGCCACACTTGCTGTTGCTGCTGTAGAGAGGAAGAAGAGAGAGCAGAAAAATGCGGTTTGCATCAGTTCTCAGTCAAAGAGTAGGAAGCATTCTTTCCATGAGAGTTCGTCATATCATAGTGCCGACAACTCTGTTTTTGTGCTCTTAAAAATCTATGCTTCATGTATTAATTATCTGTCAGTTACTCTGACTTTGAAAGTAGTGGTTGAATGTGCAGGAGAGCGTATATTTCGTATTGGCTCAGTTCGTTACAGAATGGATCCCTCCAGGAGGACACTCCAGAGGATTTCAGTCGATGAATCCCAGTCCTCAGGATCTACCAGTTCAGGTTTGGCTTCCAAAAGTGCTTACATTCCAAGGAGATTAGTGATTGGAAACGATGAATATGTACGAATTGGAAATGGTAACCAGCTTATCAGAGACCCAAAGAAACGAACTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCACACAGCCAGACAGCGGTTGGCTCGAAAGCAGAAGTATTGTCAGTTTTTTACCAGATTTGGGAAATGTAAAAAGGATGGAGGGAAGTGTCCTTATATTCATGATCCTTCAAAAATTGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTAACGCACCAGGTTATTCCAGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGTTTATGCTCAAACAGTAATTGTCCTTATAGACATGTCAATGTGAACCCCAATGCATCTATTTGTGAAGGATTTCTCAGGGGATATTGTGCTGATGGAAATGAGTGTCGGAAGAAGCACAGCTATGTCTGTCCTACTTTTGAAGCAACAGGAAGCTGTACTGAAGGATCCAAATGCAAACTTCATCACCCCAAAAAACAAAGCAAGGGAAAGAAAAGGAAGAGATCTGGAGATCAGAACAAGACCAGAGGACGTTATTTTGGTTCTATTCCTGCAGCTGATGTTTCTGAATCTGGGATGATGGTTGCTCCAAACCGGCATAAACAAAGTAGTGAAATTGAAGAGGAACTGTCTGACTACATCAGCCTTGATGTTATGAGTGAAGAAGTGGCAGACACCGATGATCTATCATTTGATCCAGCAGAGTTGTGTGAGAATGACTCCTTGGATGATCTTGATGAACTCATTAAACCAGTTCTTTTATTGAAAACAAAGTTCACATCACAATCACCTGACTCATATCTTCCACGCAAGTGGTGGAGACTTAGGTCCTTTGTTAATGAGGTAATTTAG 6150 0.4317 MDQHHFLHHHYHHPQDHRTTRYTSLNPQSHHHHHHHSNLPPPPPAPPPPLSYHRTLHAAPLSQPYTPSTPQPQQQQQQQFSFNHHTSLPHRTLEDDSRSLTYDLLPRRTTAIPWNPNPRTDDFDREFHHHHHRPPPPPPPPIETLRYDPGRRDRLVVDAYEQNPREALAWGGGDYHAPSQGDVEPAPYVRVYSVECDTDVAGRGSRVESKRWVMSDRERERERGRELHESSSNLVSKGSNSDKYYHGSDNVDRYSRGNSRERGHEFARTPPKKQVQKKSALLRIQTVKPNHRNREVEQLRYPGYGPEGSNGFFRGKEPYLAHGVKGEEREGSPVEIDISFESNSLVAKAIVAPPSSSVSVPDLNVTPVLDSDLGSGEKNKRVSGSDGYYSGLQQPYRMSSVVVVDLNRSPCKGNDRSGLRKEVNVRKSVKNSSSRSRTREADDSRGKNAVPNSVKAGNVCSGKSTITVVKKKRIVKRMVKRKACLNSMTSVPNSLPAERLPGTVEVESAALVSSTASNPEKIEANSDEKSNIVEEVPDCLHSLPKEGNVLKEDKEGGLPQLSLGPDSTSQDCESDKDSDNREVSRFEIERDGNISKFPSRASSSEDKKSDSGCLDVNNDVFDNGNIIFMHDNANTSDCLGANNSVPGTDTVTEFLSGSTISEVNHMDYGNKQLSQNEGSLSVGNYSNVQSPLNNNLVDAGDEILKTSDTFSSSRKIRIQDGLDCLQHSSALKQGSDNGSSNLEDCIVHGSGIMHDAGNQLAHGDVTMHPENCETEKTFPDSNILAGSGEGNTKKIKKRKARTQLNILSSEMESLSPDHVNPVSLANNVDGGTGLMSKDPSASIVLDQSVQNDVDSITGLDGVTALHEEGEFLETQFYAANNNNDDANEVSPSSKRKKVTANPNFTQCQSEISAVIVVTTTSDVETPVNLNDNQEHQKEFALSSMGMCIPSSVQSMPYSESITKMSDNIFSGGSFDSTDANRETMSSEYSELQHSDIVSFSPCEDLAFQNDHFSPLEGECKENITPVVLVSNTQIGVLGVGNTLGEKTDLQAVKGNYQYRDFVQRSPRPDMEPNDLNVKNDLLAQQNLMSCPTSGDEVTTSNSNDEFIVDAPGALSDIFSQGMASEVPDRRSLEFTAINDENICGVEENTSSVHQTIQNSRSDSAFGHSNMITKKTISEPSQVSSKVTTQALNSYRFGLSGTKNQSGSVIPKTFPGHSFTFLKSETKTSASSTHVSKPRTWHRTGNNPPISVPRINSVRTVPPKRPILERKGNFQNTSYVRKGNSLVRKPTPVPALPQISSVNKSSSSGFGEISKSTKSESRADVTDQPMYLRAGATYSQQRQRQRTPPLPIDTKSEENTSSSLVEPSGGSCENVSDPKTFIEINNNAQNSSEDALKHCEILENQPVPSDNGESQVEVNEGNPLSLNTKRIVYIKPKTNQLVATSNSCDVSVSTDDNGQTAFSDGYYKRRKNQLVRTTFESHTNQTAVVPNGMANSDGQGTSNALCNTRFSKKRLHKAVRSSCKRSRASLVWTLCSKNSSEHDRNSRHNQKVLPQLFRWKRATFASSFNSSSVSAISKKLLQLRKRDTVYTRSKHGFSLWKSRVLGVGGCSLKWSKSIEKNSKQANEEATLAVAAVERKKREQKNAVCISSQSKSRKHSFHESSSYHSADNSVFVLLKIYASCINYLSVTLTLKVVVECAGERIFRIGSVRYRMDPSRRTLQRISVDESQSSGSTSSGLASKSAYIPRRLVIGNDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCKKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHQVIPERMPDCSYFLQGLCSNSNCPYRHVNVNPNASICEGFLRGYCADGNECRKKHSYVCPTFEATGSCTEGSKCKLHHPKKQSKGKKRKRSGDQNKTRGRYFGSIPAADVSESGMMVAPNRHKQSSEIEEELSDYISLDVMSEEVADTDDLSFDPAELCENDSLDDLDELIKPVLLLKTKFTSQSPDSYLPRKWWRLRSFVNEVI 2049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01024 2049 MobiDBLite consensus disorder prediction 409 456 - -
Viun8g01024 2049 Coils Coil 1384 1404 - -
Viun8g01024 2049 FunFam zinc finger CCCH domain-containing protein 3 1823 1874 - -
Viun8g01024 2049 ProSiteProfiles Zinc finger C3H1-type profile. 1875 1902 IPR000571 GO:0046872
Viun8g01024 2049 FunFam Zinc finger CCCH domain-containing protein 7 1876 1937 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 414 446 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 1921 1938 - -
Viun8g01024 2049 SUPERFAMILY beta-sandwich domain of Sec23/24 32 146 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 1332 1376 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 356 389 - -
Viun8g01024 2049 ProSiteProfiles Zinc finger C3H1-type profile. 1848 1874 IPR000571 GO:0046872
Viun8g01024 2049 MobiDBLite consensus disorder prediction 775 794 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 1295 1315 - -
Viun8g01024 2049 PANTHER CCCH ZINGC FINGER 261 2022 - -
Viun8g01024 2049 SMART c3hfinal6 1875 1901 IPR000571 GO:0046872
Viun8g01024 2049 SMART c3hfinal6 1848 1873 IPR000571 GO:0046872
Viun8g01024 2049 SMART c3hfinal6 1822 1846 IPR000571 GO:0046872
Viun8g01024 2049 SMART c3hfinal6 1793 1821 IPR000571 GO:0046872
Viun8g01024 2049 SMART c3hfinal6 1902 1924 IPR000571 GO:0046872
Viun8g01024 2049 MobiDBLite consensus disorder prediction 246 272 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 203 230 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 550 614 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 61 80 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 1229 1253 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 1271 1376 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 511 530 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 1911 1944 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 203 278 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 113 147 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 39 53 - -
Viun8g01024 2049 Gene3D - 1820 1874 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 1 80 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 119 133 - -
Viun8g01024 2049 Gene3D - 1875 1938 - -
Viun8g01024 2049 Coils Coil 1625 1645 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 570 594 - -
Viun8g01024 2049 MobiDBLite consensus disorder prediction 231 245 - -
Viun8g01024 2049 ProSiteProfiles Zinc finger C3H1-type profile. 1793 1822 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01024 Viun-Chr8 11739372 11748555 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Viun8g01024 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01024 - - vun:114193719 3894.74