Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01022 ATGGATCAACACCACTTCCTCCACCACCACTACCACCACCCTCAGGACCACCGCACCACCCGCTACACTTCCCTTAACCCTCAATCGCATCACCACCACCACCACCATAGCAACCTCCCACCGCCGCCGCCAGCGCCGCCGCCGCCTCTCTCCTACCACCGCACCCTCCACGCGGCTCCCCTGTCGCAACCCTACACCCCTTCCACTCCCCAACCCCAACAGCAGCAGCAGCAGCAATTCTCTTTCAACCACCACACATCTCTCCCCCACCGCACCCTCGAAGACGATTCACGTTCTCTCACCTACGACCTCCTTCCTCGCCGCACCACCGCCATCCCCTGGAACCCTAACCCTAGAACTGATGATTTCGATCGCGAATTCCACCACCACCACCACCGCCCTCCCCCGCCGCCGCCTCCCCCGATCGAAACCCTCCGCTATGACCCTGGGCGCCGTGACCGCCTCGTGGTGGATGCCTACGAGCAAAACCCCAGGGAGGCGCTCGCGTGGGGCGGCGGTGACTACCACGCGCCTAGCCAGGGCGACGTAGAGCCAGCACCCTACGTGCGCGTGTACAGCGTGGAATGTGACACTGACGTGGCCGGTAGAGGGTCCCGGGTGGAGAGCAAGAGGTGGGTGATGAGTGATAGAGAGAGGGAGAGGGAGAGGGGAAGAGAGTTGCACGAGTCTTCTTCTAATTTAGTTAGCAAGGGTAGTAACAGTGACAAATATTATCATGGTTCTGATAATGTGGATAGGTATAGTAGAGGGAATAGTAGAGAGCGTGGTCATGAATTCGCACGTACTCCTCCTAAGAAACAGGTGCAGAAGAAGAGCGCGCTTCTTAGGATTCAGACTGTTAAACCTAATCATAGGAACCGTGAGGTTGAGCAGTTACGGTACCCCGGTTATGGACCTGAAGGTAGCAATGGCTTTTTCAGGGGAAAGGAGCCATATTTGGCTCATGGGGTGAAGGGGGAAGAGAGAGAAGGGAGCCCTGTTGAGATTGATATCTCGTTTGAGTCCAATTCTCTGGTGGCCAAGGCTATTGTTGCGCCGCCTTCGAGTTCAGTGTCTGTTCCTGATTTGAATGTGACGCCGGTTTTAGATTCGGATTTGGGTTCTGGGGAGAAGAATAAAAGGGTTTCGGGCTCTGATGGCTATTACTCTGGTTTGCAGCAGCCGTATAGAATGTCTTCCGTTGTGGTTGTGGATTTAAATAGGTCGCCTTGCAAAGGGAATGATAGGTCTGGTTTGAGGAAGGAGGTTAATGTGCGGAAGAGTGTTAAGAATAGTTCTTCTCGGTCTCGCACCAGGGAGGCTGATGATTCTCGTGGGAAAAATGCGGTGCCAAATTCAGTTAAAGCTGGCAATGTCTGTTCTGGTAAATCGACCATAACGGTTGTCAAGAAGAAGAGAATTGTTAAGAGAATGGTGAAGAGGAAAGCTTGTTTAAACTCTATGACATCTGTGCCGAATTCACTGCCGGCAGAAAGGCTTCCTGGAACCGTGGAAGTCGAGAGTGCTGCACTGGTTTCGTCAACGGCCTCTAATCCTGAGAAAATTGAAGCTAATTCAGATGAGAAAAGCAACATCGTTGAGGAAGTGCCAGACTGTTTACATTCTTTGCCAAAGGAAGGTAATGTATTGAAAGAAGATAAAGAGGGAGGTTTACCGCAGCTGAGTTTGGGGCCAGATTCCACATCGCAAGATTGTGAGAGTGACAAAGATTCTGATAATAGGGAAGTATCCAGGTTTGAAATTGAAAGAGATGGAAACATTTCAAAATTTCCATCTCGTGCTTCTAGTAGTGAAGATAAGAAGAGTGATTCAGGTTGTTTAGATGTTAATAATGATGTCTTTGATAATGGAAATATTATTTTTATGCATGATAATGCAAATACTTCCGATTGTTTAGGTGCAAATAATTCTGTTCCAGGTACTGACACGGTTACTGAATTCTTAAGTGGGAGTACTATTTCTGAAGTCAATCACATGGATTATGGTAATAAGCAATTAAGTCAGAATGAAGGGTCTCTATCAGTTGGGAATTATTCAAATGTACAATCCCCACTGAATAACAATCTTGTAGATGCAGGGGATGAAATATTAAAAACCAGCGATACTTTTTCGAGTTCAAGAAAAATTAGGATTCAAGATGGTCTAGATTGCCTACAACATTCCAGTGCACTGAAGCAAGGCTCTGATAATGGATCATCTAATTTAGAAGATTGTATTGTTCACGGCTCTGGTATCATGCATGATGCTGGGAACCAATTGGCCCATGGTGATGTCACCATGCACCCTGAGAATTGTGAGACAGAAAAAACATTCCCAGATTCTAATATTTTAGCTGGATCTGGTGAAGGGAACACAAAGAAGATAAAAAAGAGAAAAGCTAGAACACAATTAAATATTTTGAGTTCAGAGATGGAGTCCTTATCTCCAGATCATGTAAATCCTGTTAGCCTTGCTAATAATGTGGATGGAGGCACGGGTCTAATGTCGAAAGATCCATCTGCTTCTATAGTTTTAGATCAGTCTGTTCAAAACGATGTTGACTCAATAACTGGTTTGGATGGGGTTACTGCTTTACATGAGGAAGGGGAGTTTTTAGAGACTCAGTTTTATGCTGCAAATAACAACAATGATGATGCAAATGAGGTTTCACCATCTTCTAAAAGGAAAAAAGTCACAGCTAACCCAAATTTCACTCAATGTCAATCAGAAATCAGTGCTGTTATTGTGGTTACCACCACATCTGATGTGGAAACTCCAGTCAATCTCAATGATAACCAAGAACATCAGAAAGAATTTGCTTTGTCAAGCATGGGTATGTGCATACCGTCTTCTGTTCAGTCAATGCCTTATTCAGAGAGTATTACCAAAATGTCTGACAATATTTTTAGTGGAGGATCTTTTGACTCTACTGATGCAAATAGGGAAACCATGAGTTCCGAGTATTCGGAATTACAACACTCAGACATAGTCTCTTTTTCACCATGTGAGGACTTGGCATTTCAAAACGATCACTTCTCACCATTGGAAGGTGAGTGCAAAGAAAACATTACTCCGGTTGTGCTTGTGAGTAATACTCAAATTGGTGTTTTAGGTGTTGGAAATACATTGGGAGAAAAGACTGATTTACAGGCCGTTAAGGGAAATTATCAATATAGAGACTTTGTGCAAAGGTCACCAAGACCTGACATGGAACCTAATGATCTCAATGTTAAGAATGATTTGCTTGCTCAGCAGAACCTTATGTCCTGTCCAACTAGTGGTGATGAAGTCACTACAAGTAATTCGAATGACGAATTCATTGTGGATGCACCTGGCGCATTATCAGATATCTTTTCTCAAGGGATGGCATCTGAAGTACCGGATAGAAGGTCTTTAGAATTCACAGCTATCAATGATGAAAATATTTGTGGGGTTGAAGAAAATACTTCGTCGGTACATCAGACGATACAGAATAGTAGGTCAGATAGTGCATTTGGACACAGTAATATGATAACAAAGAAAACAATTTCAGAACCATCCCAAGTTTCTTCCAAAGTTACAACTCAGGCTCTAAATTCATATCGTTTTGGGTTGAGTGGGACCAAAAATCAGTCAGGTAGTGTCATTCCCAAAACTTTTCCAGGTCATTCTTTTACCTTTTTGAAGTCGGAGACGAAGACATCTGCCTCTTCAACTCATGTGTCAAAGCCTCGAACTTGGCATCGGACAGGTAATAATCCCCCTATTTCTGTACCTAGAATCAATTCAGTAAGAACAGTTCCTCCCAAAAGGCCAATTCTGGAAAGGAAAGGGAACTTTCAAAATACCTCGTATGTTCGTAAAGGAAACAGTCTTGTAAGGAAACCTACCCCAGTTCCTGCTCTACCTCAAATCTCCTCTGTTAATAAGTCATCTTCTTCGGGCTTTGGTGAAATATCAAAAAGCACTAAATCTGAAAGCAGGGCTGACGTGACAGATCAACCAATGTACCTGAGAGCAGGAGCAACATATTCTCAGCAGAGGCAGAGGCAGAGAACACCTCCACTACCAATTGACACCAAATCAGAGGAAAATACATCTTCCTCATTGGTAGAACCTTCTGGTGGTTCCTGTGAAAATGTATCTGATCCTAAAACATTTATAGAAATTAATAATAATGCACAGAACTCTTCTGAAGATGCACTGAAGCATTGTGAAATTCTAGAAAACCAACCTGTTCCATCCGATAATGGGGAGAGTCAAGTTGAAGTAAACGAAGGCAATCCTCTTTCTTTGAATACGAAGAGAATAGTATATATAAAGCCCAAAACAAATCAATTGGTTGCAACATCAAATTCGTGTGATGTGTCTGTCTCCACTGATGACAATGGCCAAACTGCCTTCTCTGATGGCTACTACAAGAGAAGAAAAAATCAATTGGTTAGGACTACATTTGAAAGCCACACCAACCAAACTGCTGTAGTGCCTAATGGCATGGCAAATTCTGATGGACAAGGAACTAGTAATGCTCTTTGCAATACGAGGTTTAGTAAGAAGCGGTTACATAAGGCTGTCAGGAGTTCATGCAAACGTTCAAGAGCCTCACTAGTGTGGACACTCTGTAGCAAAAATTCTTCTGAACATGACAGGAATTCACGTCATAATCAAAAGGTTTTACCTCAATTGTTTCGATGGAAAAGAGCAACATTTGCTTCAAGCTTCAACAGCAGTTCCGTATCTGCAATCAGGTCAAAACATGGGTTTTCACTTTGGAAATCCAGGGTTTTAGGTGTTGGTGGTTGCAGTTTGAAATGGTCCAAATCCATTGAGAAGAACTCAAAGCAAGCTAATGAGGAAGCCACACTTGCTGTTGCTGCTGTAGAGAGGAAGAAGAGAGAGCAGAAAAATGCGGTTTGCATCAGTTCTCAGTCAAAGAGAGAGCGTATATTTCGTATTGGCTCAGTTCGTTACAGAATGGATCCCTCCAGGAGGACACTCCAGAGGATTTCAGTCGATGAATCCCAGTCCTCAGGATCTACCAGTTCAGGTTTGGCTTCCAAAAGTGCTTACATTCCAAGGAGATTAGTGATTGGAAACGATGAATATGTACGAATTGGAAATGGTAACCAGCTTATCAGAGACCCAAAGAAACGAACTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCACACAGCCAGACAGCGGTTGGCTCGAAAGCAGAAGTATTGTCAGTTTTTTACCAGATTTGGGAAATGTAAAAAGGATGGAGGGAAGTGTCCTTATATTCATGATCCTTCAAAAATTGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTAACGCACCAGGTTATTCCAGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGTTTATGCTCAAACAGTAATTGTCCTTATAGACATGTCAATGTGAACCCCAATGCATCTATTTGTGAAGGATTTCTCAGGGGATATTGTGCTGATGGAAATGAGTGTCGGAAGAAGCACAGCTATGTCTGTCCTACTTTTGAAGCAACAGGAAGCTGTACTGAAGGATCCAAATGCAAACTTCATCACCCCAAAAAACAAAGCAAGGGAAAGAAAAGGAAGAGATCTGGAGATCAGAACAAGACCAGAGGACGTTATTTTGGTTCTATTCCTGCAGCTGATGTTTCTGAATCTGGGATGATGGTTGCTCCAAACCGGCATAAACAAAGTAGTGAAATTGAAGAGGAACTGTCTGACTACATCAGCCTTGATGTTATGAGTGAAGAAGTGGCAGACACCGATGATCTATCATTTGATCCAGCAGAGTTGTGTGAGAATGACTCCTTGGATGATCTTGATGAACTCATTAAACCAGTTCTTTTATTGAAAACAAAGTTCACATCACAATCACCTGACTCATATCTTCCACGCAAGTGGTGGAGACTTAGGTCCTTTGTTAATGAGGTAATTTAG 5967 0.4339 MDQHHFLHHHYHHPQDHRTTRYTSLNPQSHHHHHHHSNLPPPPPAPPPPLSYHRTLHAAPLSQPYTPSTPQPQQQQQQQFSFNHHTSLPHRTLEDDSRSLTYDLLPRRTTAIPWNPNPRTDDFDREFHHHHHRPPPPPPPPIETLRYDPGRRDRLVVDAYEQNPREALAWGGGDYHAPSQGDVEPAPYVRVYSVECDTDVAGRGSRVESKRWVMSDRERERERGRELHESSSNLVSKGSNSDKYYHGSDNVDRYSRGNSRERGHEFARTPPKKQVQKKSALLRIQTVKPNHRNREVEQLRYPGYGPEGSNGFFRGKEPYLAHGVKGEEREGSPVEIDISFESNSLVAKAIVAPPSSSVSVPDLNVTPVLDSDLGSGEKNKRVSGSDGYYSGLQQPYRMSSVVVVDLNRSPCKGNDRSGLRKEVNVRKSVKNSSSRSRTREADDSRGKNAVPNSVKAGNVCSGKSTITVVKKKRIVKRMVKRKACLNSMTSVPNSLPAERLPGTVEVESAALVSSTASNPEKIEANSDEKSNIVEEVPDCLHSLPKEGNVLKEDKEGGLPQLSLGPDSTSQDCESDKDSDNREVSRFEIERDGNISKFPSRASSSEDKKSDSGCLDVNNDVFDNGNIIFMHDNANTSDCLGANNSVPGTDTVTEFLSGSTISEVNHMDYGNKQLSQNEGSLSVGNYSNVQSPLNNNLVDAGDEILKTSDTFSSSRKIRIQDGLDCLQHSSALKQGSDNGSSNLEDCIVHGSGIMHDAGNQLAHGDVTMHPENCETEKTFPDSNILAGSGEGNTKKIKKRKARTQLNILSSEMESLSPDHVNPVSLANNVDGGTGLMSKDPSASIVLDQSVQNDVDSITGLDGVTALHEEGEFLETQFYAANNNNDDANEVSPSSKRKKVTANPNFTQCQSEISAVIVVTTTSDVETPVNLNDNQEHQKEFALSSMGMCIPSSVQSMPYSESITKMSDNIFSGGSFDSTDANRETMSSEYSELQHSDIVSFSPCEDLAFQNDHFSPLEGECKENITPVVLVSNTQIGVLGVGNTLGEKTDLQAVKGNYQYRDFVQRSPRPDMEPNDLNVKNDLLAQQNLMSCPTSGDEVTTSNSNDEFIVDAPGALSDIFSQGMASEVPDRRSLEFTAINDENICGVEENTSSVHQTIQNSRSDSAFGHSNMITKKTISEPSQVSSKVTTQALNSYRFGLSGTKNQSGSVIPKTFPGHSFTFLKSETKTSASSTHVSKPRTWHRTGNNPPISVPRINSVRTVPPKRPILERKGNFQNTSYVRKGNSLVRKPTPVPALPQISSVNKSSSSGFGEISKSTKSESRADVTDQPMYLRAGATYSQQRQRQRTPPLPIDTKSEENTSSSLVEPSGGSCENVSDPKTFIEINNNAQNSSEDALKHCEILENQPVPSDNGESQVEVNEGNPLSLNTKRIVYIKPKTNQLVATSNSCDVSVSTDDNGQTAFSDGYYKRRKNQLVRTTFESHTNQTAVVPNGMANSDGQGTSNALCNTRFSKKRLHKAVRSSCKRSRASLVWTLCSKNSSEHDRNSRHNQKVLPQLFRWKRATFASSFNSSSVSAIRSKHGFSLWKSRVLGVGGCSLKWSKSIEKNSKQANEEATLAVAAVERKKREQKNAVCISSQSKRERIFRIGSVRYRMDPSRRTLQRISVDESQSSGSTSSGLASKSAYIPRRLVIGNDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCKKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHQVIPERMPDCSYFLQGLCSNSNCPYRHVNVNPNASICEGFLRGYCADGNECRKKHSYVCPTFEATGSCTEGSKCKLHHPKKQSKGKKRKRSGDQNKTRGRYFGSIPAADVSESGMMVAPNRHKQSSEIEEELSDYISLDVMSEEVADTDDLSFDPAELCENDSLDDLDELIKPVLLLKTKFTSQSPDSYLPRKWWRLRSFVNEVI 1988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01022 1988 MobiDBLite consensus disorder prediction 409 456 - -
Viun8g01022 1988 Coils Coil 1384 1404 - -
Viun8g01022 1988 ProSiteProfiles Zinc finger C3H1-type profile. 1732 1761 IPR000571 GO:0046872
Viun8g01022 1988 MobiDBLite consensus disorder prediction 1860 1877 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 414 446 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 1332 1376 - -
Viun8g01022 1988 FunFam zinc finger CCCH domain-containing protein 3 1762 1813 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 356 389 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 775 794 - -
Viun8g01022 1988 ProSiteProfiles Zinc finger C3H1-type profile. 1814 1841 IPR000571 GO:0046872
Viun8g01022 1988 MobiDBLite consensus disorder prediction 1295 1315 - -
Viun8g01022 1988 Coils Coil 1610 1630 - -
Viun8g01022 1988 FunFam Zinc finger CCCH domain-containing protein 7 1815 1876 - -
Viun8g01022 1988 SMART c3hfinal6 1732 1760 IPR000571 GO:0046872
Viun8g01022 1988 SMART c3hfinal6 1761 1785 IPR000571 GO:0046872
Viun8g01022 1988 SMART c3hfinal6 1841 1863 IPR000571 GO:0046872
Viun8g01022 1988 SMART c3hfinal6 1814 1840 IPR000571 GO:0046872
Viun8g01022 1988 SMART c3hfinal6 1787 1812 IPR000571 GO:0046872
Viun8g01022 1988 MobiDBLite consensus disorder prediction 246 272 - -
Viun8g01022 1988 Gene3D - 1759 1813 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 203 230 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 550 614 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 61 80 - -
Viun8g01022 1988 SUPERFAMILY beta-sandwich domain of Sec23/24 32 146 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 1229 1253 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 1271 1376 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 511 530 - -
Viun8g01022 1988 PANTHER CCCH ZINGC FINGER 261 1961 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 1850 1882 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 203 278 - -
Viun8g01022 1988 Gene3D - 1814 1877 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 39 53 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 113 147 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 1 80 - -
Viun8g01022 1988 ProSiteProfiles Zinc finger C3H1-type profile. 1787 1813 IPR000571 GO:0046872
Viun8g01022 1988 MobiDBLite consensus disorder prediction 119 133 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 570 594 - -
Viun8g01022 1988 MobiDBLite consensus disorder prediction 231 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01022 Viun-Chr8 11739372 11748556 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Viun8g01022 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01022 - - vun:114193719 3752.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01022 8 11739372 11748556 Viun8g01022 8 11739372 11748556 ECH