Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01015 ATGCAGCAAGAGGATATGCAGTCACCATGGTCCTTCTTTGAAGACATGAACTCAACTTTTGAATCAGGTGTTGAGTCCTATGGCTTCTCTATGTATGACCATGTTGGTGATTCTGGATCCTATGGCTTCATTGTGGATGACCATGGACTCAATACACTATTGAGCACTCTAGAGGATTCCACTTCTGAAATTTCTTCCATACCCTTTTCTTCCTCTTCCTTATTCTTCTCCAATGATCATGTTCACACCCAATACCCAATCATTGAAGAAACTGGGCAACTTCCATCACTCATGGAATTGGATGATTTTGATTCCATTTTGGATACTGAAATTGTTAGTATTGAAGGTCATGGATACCTAAGGGAGAGTGAAGGGAGCTTCTTTCCTACACAGACTTTTTCAAGTGAGGTGGAAAATGCTTGGAGTCCTACCCCATCTGTGAGGTCAGAGTTGTCCACAAATCAAGCATCATCACTATTGACTTTACCTCACCAAAACATGGAAATTGAAAACCAAGTGAGTCTTCCACACTTGCTAGAGGCACATGGAGAGGCCTTGGAGCAAGGACAAAAGTCACTAGCAGAAGTGATTTTGAGGTGCATGAGTCAGAAAGCTAGTCCACTAGGTGAGTCTCTAGAGCGCCTTGTGTTCTACTTGTCTCAAAGCATGACCAATCATGGAGACTATCTCAAAGGTGAGGCCTTCAAGAACTTTGAGGCTGCTTTGAGGGCACTCTATCAAGGTCTCCCAATTGGGAGAGTTGCTCACTTTGCTGCTGTTTCTGCAATTCTTGAAGCCATGCCACAAGATTGTAATAGTGTACACATAGTGGACTCTTGTGTTGGACATGGATTTCAATGGGTTCCATTGATTGAGGCCATTGCACACATGAACAAAACAGTGAAACTGACATCAATTAAATGGGGTGGTGGTGATGAATGTTTTTCTAGTCCATCAAATTTTGAGGAAACTAGAAAGCTGCTCTGTGAGCATGCCAAATCCTGTGGTTTGAAGTTGAAGGTAGAGGAGAAAGGAGTGGAGGAACTTGTTGCTGAGATTAAGAAAATGAACAAAAGGGGTGGGAAAGGTGCGTTTTTGGCCTTCAATTCCATGATTGGTCTTCCTCATATGGGAAGAGAAAGTAGCAGAAGACAAGCCTCAGAGTTTCTAAGGGTAGCTGAAGATTTGATCAACACCTCTGGCAATAGGGGGATTATAACTTTTGGTGATGGAAGTGCTTATCAGAAAGTGAAAAACAACTTCAATTTCAGGTCATTCTTTAAAGTACATTTGGAGCATTACCAAGCCTTGTTAGAAGCAATTGAATCACATTTCCCAACTCGTTTCTCAGAAGCAAGAATCACCATGGAGCAACTGTTTTTGCAACCTTGTATTTCCTCTCTTGATTGGTTACAAATATGGGAGGAGATGCAGAGTGATGAGATTAGCTTTAAGGGTTGCCAATTGAGCAAAAATATTTTGATGGAAACCAGAGAAGTGTTGAGAGGAAATGAAGGTTCATATCAAGCAAGGATCGAAGGACAAAATGACAATGAACTAGTTTTGGAGTACAAAGGAACAAAACTGTTAAGATTTTCAACTTGGAAAAACTAA 1614 0.412 MQQEDMQSPWSFFEDMNSTFESGVESYGFSMYDHVGDSGSYGFIVDDHGLNTLLSTLEDSTSEISSIPFSSSSLFFSNDHVHTQYPIIEETGQLPSLMELDDFDSILDTEIVSIEGHGYLRESEGSFFPTQTFSSEVENAWSPTPSVRSELSTNQASSLLTLPHQNMEIENQVSLPHLLEAHGEALEQGQKSLAEVILRCMSQKASPLGESLERLVFYLSQSMTNHGDYLKGEAFKNFEAALRALYQGLPIGRVAHFAAVSAILEAMPQDCNSVHIVDSCVGHGFQWVPLIEAIAHMNKTVKLTSIKWGGGDECFSSPSNFEETRKLLCEHAKSCGLKLKVEEKGVEELVAEIKKMNKRGGKGAFLAFNSMIGLPHMGRESSRRQASEFLRVAEDLINTSGNRGIITFGDGSAYQKVKNNFNFRSFFKVHLEHYQALLEAIESHFPTRFSEARITMEQLFLQPCISSLDWLQIWEEMQSDEISFKGCQLSKNILMETREVLRGNEGSYQARIEGQNDNELVLEYKGTKLLRFSTWKN 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01015 537 ProSiteProfiles GRAS family profile. 166 536 IPR005202 -
Viun8g01015 537 Coils Coil 339 359 - -
Viun8g01015 537 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 157 509 IPR005202 -
Viun8g01015 537 Pfam GRAS domain family 177 536 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01015 Viun-Chr8 11663474 11665259 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01015 176 468 GRAS Transcription Factor Family AT5G66770 25.490 6.32e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun8g01015 GRAS 8.9e-34 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01015 - - gmx:100784347 796.193