Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01005 ATGGCAACAATGAGATTGAATAAGGACACGCAGAAGGAACTGACCAGACTGACCGTGGTATTACTGATGGTTTTAGCAGCAGCGAGCCAAGCCCTGCCCGGCTGCCCGAACTCCTGCGGAAGTGTTTCATCAATTCCGTATCCATTCGGCGTCGGCTCTTCATCCGTCACCGGTGAAAACTGTTTTCTGGAGGGAGAATTGGAGCTCAGATGCACAAACTCAACCTTATATCACGGCGACGGTAACGTCCAAATTCTGAACATAAGCCTCGCCGGTAAACTGGACATGCTCGCCTTCATCTCCGAGGTCTGCAAAAACGAATTGTTAGGTGGAGTAGAAACACATGGCAACGATCCCTTTCTCAGAACACCAGCCTTCGCCATTTCTAGCGAGGATAACAAGTTCGTGAGCGTAGGCTGCGACACCTACGGCTATCTCAACAGTTTCCGCAACGGCACAGAATCTTCCACGGGGTGCTTGACCAGATGCGACACCTTAGAGAGCGTCCAAAGCATGCAGAGAAGCGGAAACTGCACCGGCATAGGGTGTTGCCAGGTCGACATTCCTCCTGGCATGAAGAACATCACTTTTCAAGCTTTCTCCTTCAACAATTTCAATTCCACTTCCGATTTCAACAAGTGTGGCTACTCCTTCGTCGTCAAAAACGGCAACTACACCTTCTCCGTCGACCATTTAAACGGCGTCCCGTTCACTATGTCACCCCTTGTCATGGATTGGAGCGTTGGAAACGACACGTGCGAAGCCTCCGAGCTCAGAGCAGATTATGCATGCAAGAGTCCTTATAGCGACTGTGAGAACTCGCCGTTTGAATATGGTTACCGATGCAACTGTAAACCAGGGTTTCAGGGAAACGCGTACCTTCTCGATGGTTGCCAAGACTTTCCTGAGTGTAGTAATAACAAACACAATTGCGATAGTAAAGATCATTGTCGTGAGACTCCGGGTTCCTTTGAATGTTTCTGTCCTGACGGACTTATCGGAAATGGGACAAAAGAAGGCGGAGGATGCCACCCAAAGCAGCCGGCCGATGCTTTTACGAAGATCGTCATCGGTGCAAGTGTAGGATTAATTGCCCTTTTCATAGGGATTTCTTGGTTGTACTTGATGTACCAAAAAAGGAAAGTCTTAAAATTGAAGCAGAAGTTTTTTCAGCAGAACGGAGGCATCATTCTGAGACAACAACTCGCCACAAGAGAAGACTCATCTCAGACCACTACAATTTTTAGTGCAGAAGAACTTAAGAAAGCCACCAACAATTTTGATGAGAGCTTAATCATAGGTAAAGGAGGTTATGGTACAGTTTTCAAAGGAGTTCTCTCAAACAACAAAGTTGTAGCAATCAAAAAGTCCAAAATAGTGGATCAGAGCCAGGTGGAACAATTCATCAATGAGGTCATTATACTGTCACAGATAAACCATAGGAATGTGGTCAAACTCTTGGGATGTTGTCTAGAGACAGAAGTTCCTTTACTGGTCTATGAATTTGTTAATAATGGCACCCTTTTTGATTATTTACATAACCAAGGTCAGGGAGTCAATGTTTCATGGAAAACGCGTCTAAGGATAGCTACAGAAGCAGCTGCAGCTCTATCATATTTGCACTCAGCAGCTTCCATACCTATCATCCACAGAGATGTGAAGACTGCTAACATACTCTTAGATGACACTTACACTGCCAAAGTTTCTGACTTTGGAGCTTCAAGATTGGTTCCACTTGACCAAACTGAAATAGCTACAATTGTGCAAGGAACCTTTGGGTATTTAGACCCGGAGTACATGCAATCAAGCCAGTTGACTGAAAAGAGCGATGTTTATAGCTTTGGAGTGGTTCTTGTAGAGCTGCTAACGGGGGATAAACCTTTCTCTTTTGACAGGGCAGAAGAGAAACAGAGTCTTACAGTTTACTTTCTGCGTAGCTTGAAAGAGGATCGTTTATTTGATATCCTTCAACTAGGTCTTTTAGATAAAGAAAACCAGCAAGATATTATGCAGGTTGCTATTCTTGCTGCCAGGTGCCTAAGACTTATAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGACAATGGAATTAGAAGGAATAAAGCTTATAGAGAAACACCCTTGGATCAATACAGGAAAAAACTTTGAAGAGAGTCAATACTTGCTTCACGAGGCACAAAGCAATTATGAACATGGTGATAGTAGTAGTGGCCAACAAGGATATGATAGCTTGAGAGAACTTGAACTAATTGACTTTGGTAATGGAAGATGA 2271 0.4439 MATMRLNKDTQKELTRLTVVLLMVLAAASQALPGCPNSCGSVSSIPYPFGVGSSSVTGENCFLEGELELRCTNSTLYHGDGNVQILNISLAGKLDMLAFISEVCKNELLGGVETHGNDPFLRTPAFAISSEDNKFVSVGCDTYGYLNSFRNGTESSTGCLTRCDTLESVQSMQRSGNCTGIGCCQVDIPPGMKNITFQAFSFNNFNSTSDFNKCGYSFVVKNGNYTFSVDHLNGVPFTMSPLVMDWSVGNDTCEASELRADYACKSPYSDCENSPFEYGYRCNCKPGFQGNAYLLDGCQDFPECSNNKHNCDSKDHCRETPGSFECFCPDGLIGNGTKEGGGCHPKQPADAFTKIVIGASVGLIALFIGISWLYLMYQKRKVLKLKQKFFQQNGGIILRQQLATREDSSQTTTIFSAEELKKATNNFDESLIIGKGGYGTVFKGVLSNNKVVAIKKSKIVDQSQVEQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYLHNQGQGVNVSWKTRLRIATEAAAALSYLHSAASIPIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQSSQLTEKSDVYSFGVVLVELLTGDKPFSFDRAEEKQSLTVYFLRSLKEDRLFDILQLGLLDKENQQDIMQVAILAARCLRLIGEERPSMKEVTMELEGIKLIEKHPWINTGKNFEESQYLLHEAQSNYEHGDSSSGQQGYDSLRELELIDFGNGR 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01005 756 Gene3D Transferase(Phosphotransferase) domain 1 503 717 - -
Viun8g01005 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Viun8g01005 756 CDD STKc_IRAK 433 700 - -
Viun8g01005 756 CDD EGF 303 337 - -
Viun8g01005 756 Gene3D Phosphorylase Kinase; domain 1 394 502 - -
Viun8g01005 756 SUPERFAMILY EGF/Laminin 303 337 - -
Viun8g01005 756 FunFam Wall-associated receptor kinase 2 397 502 - -
Viun8g01005 756 FunFam Fibrillin 2 295 339 - -
Viun8g01005 756 ProSiteProfiles Protein kinase domain profile. 427 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01005 756 ProSitePatterns Protein kinases ATP-binding region signature. 433 456 IPR017441 GO:0005524
Viun8g01005 756 Pfam Protein kinase domain 431 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01005 756 ProSiteProfiles EGF-like domain profile. 300 338 IPR000742 -
Viun8g01005 756 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 706 IPR045274 GO:0007166
Viun8g01005 756 FunFam Wall-associated receptor kinase 2 503 720 - -
Viun8g01005 756 SMART serkin_6 427 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01005 756 SMART egf_5 252 299 IPR000742 -
Viun8g01005 756 SMART egf_5 303 344 IPR000742 -
Viun8g01005 756 SUPERFAMILY Protein kinase-like (PK-like) 409 698 IPR011009 -
Viun8g01005 756 Gene3D Laminin 250 341 - -
Viun8g01005 756 Pfam EGF domain 304 337 IPR024731 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01005 Viun-Chr8 11322810 11326250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01005 29 756 Receptor kinase-like Gene Family AT1G21230 43.876 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Viun8g01005 Pkinase 8.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01005 - - gmx:100819535 1130.16