LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun8g00980	ATGCCCAATTATCGTGTTAATCACTGGAGGGAAGATGAGGATCAAAAGCTAACCCAACTTGTTCAACAACATGGTCCTCAGGACTGGAATGCAATTGCTCAACATATACAAGGACGAACTGGGAAAAGTTGCAGATTAAGGTGGCGCAATCATCTTGATCCTGGTGTTAACAGAAACCCTTTTACGAGAGAAGAAGAAGAGAGACTCCTTGCAGCTCAAGAGGTTCATGGAGCAAAATGGGCAACCACAGCCAAACTCTTCGATGGGAGAACCGACAATGCCTTGAAAAACCATTGGCACGTTTTGATCGCACGAAAGCGAAAGGAAGCCAACAATGGAAGTTTGCAAGACCTAACGATGAACGCTTCAAGTTCTTCCTCCTCTCACCATCACACATTGTTTGACATCATGAACTTCAACGCTGCACGAACCCCACTTCCACCTTCCTTCAGCCCTATCAATTTTGGATCAGTGCCATCTTTCTCAGACTCTTTTCCTGGGAAGGAAGGGAGTCATCCTTTTGGGCTGTTGAATCATCGTGATGCTGCTGCTGCTGCTGTTTCTTCTTCTTCTGGTGGAATCATGATGAGAAAGGGCTTGTTTCATAGCTCATCATCAGCATTCACTAGGTTTAAGGGTTCTTCTTCCTCTGATGATGATGCTGGATTCAAGGATGTTACTTTCTATGATTTTCTTGGTGTCGGTGCTGATGATGATGATGATGATGAGTGA	732	0.4467	MPNYRVNHWREDEDQKLTQLVQQHGPQDWNAIAQHIQGRTGKSCRLRWRNHLDPGVNRNPFTREEEERLLAAQEVHGAKWATTAKLFDGRTDNALKNHWHVLIARKRKEANNGSLQDLTMNASSSSSSHHHTLFDIMNFNAARTPLPPSFSPINFGSVPSFSDSFPGKEGSHPFGLLNHRDAAAAAVSSSSGGIMMRKGLFHSSSSAFTRFKGSSSSDDDAGFKDVTFYDFLGVGADDDDDDE	243

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Viun8g00980	243	CDD	SANT	9	52	IPR001005	-
Viun8g00980	243	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	1	56	IPR017930	-
Viun8g00980	243	CDD	SANT	60	103	IPR001005	-
Viun8g00980	243	ProSiteProfiles	Myb-like domain profile.	1	52	IPR001005	-
Viun8g00980	243	ProSiteProfiles	Myb-like domain profile.	53	103	IPR001005	-
Viun8g00980	243	SMART	sant	57	105	IPR001005	-
Viun8g00980	243	SMART	sant	5	54	IPR001005	-
Viun8g00980	243	FunFam	MYB transcription factor	7	57	-	-
Viun8g00980	243	SUPERFAMILY	Homeodomain-like	3	99	IPR009057	-
Viun8g00980	243	Gene3D	-	59	132	-	-

Showing 1 to 10 of 14 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun8g00980	Viun-Chr8	10863900	10865531	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun8g00980	2	235	MYB Transcription Factor Family	AT4G33450	39.754	1.01e-48	159

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Viun8g00980		Myb_DNA-bind_6	1.3e-19	CL0123

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun8g00980	K09422		-	gmx:102660725	213.386

Showing 1 to 1 of 1 entries