LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun8g00979	ATGTCATTGGTTATGTCTACAGAGTTGGCTGATGCATCATATAGGAATGCCAAGCTCTACACACTAAAGGGAACTGATGTTACACCTGATCTGTCCTCCCACAATTTTGTTCCAGATAAGCACAGAAACATGTATATCACAGATTCTTACTCCAGTGAGAGTTATGAAAAGTATTTCCGTGATTCACCATCAGAAGAACTGATAGAACCGTCTAGTTCCAGCATATCAGGAAACTCAGTTCACCCTGATGGTGCCTCTTCTTACCTTCTTAGAGCTAGTTCAGGAGCTTCTGTGATTGTTAATAACCCATTTGACAGTCGTATTCTGTCTACAAGGCGTCACAACAATGTCTATCAGTCCAGTTTTGAATCAGATTTTGTGGAAAATAGGAGCCCTGATGGCCTTGACTTTGATGGTGAAATGAGATTAAAACTACAAGAATTGGAGAGGGCTTTGTTTTCTGATGAAGAAGAGGAGGAGGAAGACATATTTGAGACTGTCCAAAGCATGGACATTGATCCTGACATGGCCGAGTGGGCCAATCCGCTTCAAGATATGCTACTTCATGACTCACCCAAGGAGTCCTCATCCTCAGATTCTTCCAATATTAGCAGCATAAGTAGCACCACCAAAGAAACTTCACAGAACTCACCCCAGACTCCCAAACAATTACTCTATGAATGTGCTAGAGCGCTTTCAGAAGGAAATGAAGAGCAAGCCACATCTATGATAAACAATCTCAGGCAAATGGTCTCGATTCAAGGGGAACCTTCTCAAAGAATTGCAGCCTACATGGTGGAAGGGCTTGCAGCTCGCGTTGCTTCATCCGGAAAATGCATCTATCAAGCATTGAGATGCAAAGAACCTCCTTCTTCGGATCGTCTGGCAGCTATGCAGATACTATTTGAGATCTGCCCGTGTTTTAAATTCGGATTCATCGCTGCAAATGGTGCGATAGTTGAGGCCGTCAGAGATGAAAAGAAGGTTCACATAATAGACTTTGACATCAGCCAAGGAACTCAGTACATAACTCTAATACAAGCACTTGCTGCAATGCCAGGTAGGCGACCTCATGTGAGATTAACCGGGGTGGATGATCCTGAGACTGTGCAGCGCTCCGTTGGCGGCATGAACATCATAGGAAAAAGGCTTGAAAAGCTGGCAGAGGAACTTGGATTGCCATTTGAGTTTCGAGCAGTGGCTTCAAAGACCTCAATTGTCTCACCATCAATGCTCAATTGTCGTCCGGGGGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCGTGATGAAACTGTATCCACAGTGAACGAGAGAGACCAACTTCTTCGCATGGTGAAGTGCTTGAATCCAAAACTTGTGACAATTGTGGAGCAGGACATGAACACCAACACCTCCCCTTTTCTCCAAAGATTTGTTGAAGCATACAATTACTACTCTGCTGTGTTTGACACTCTTGATGCAACTCTACCTAGGGAGAGCCAGGACAGGATGAATGTTGAAAGGCAGTGCTTGGCAAAGGACATTGTCAACATTGTGGCTTGCGAGGGCGAGGATCGGATAGAACGGTACGAAGTCGCCGGAAAATGGAGGGCAAGGTTGACCATGGCTGGCTTCACTCCATCTCCAATCAGCACAAATGTTAGAGAAGCAATTAGGAAACTCATTATTAAGCAGTACTGTGACAGGTTCAAGATAAAGGAGGAAATGGGAGCACTTCATTTTGGGTGGGAAGACAAAAACTTGATTGTTACTTCAGCATGGAAGTGA	1779	0.4452	MSLVMSTELADASYRNAKLYTLKGTDVTPDLSSHNFVPDKHRNMYITDSYSSESYEKYFRDSPSEELIEPSSSSISGNSVHPDGASSYLLRASSGASVIVNNPFDSRILSTRRHNNVYQSSFESDFVENRSPDGLDFDGEMRLKLQELERALFSDEEEEEEDIFETVQSMDIDPDMAEWANPLQDMLLHDSPKESSSSDSSNISSISSTTKETSQNSPQTPKQLLYECARALSEGNEEQATSMINNLRQMVSIQGEPSQRIAAYMVEGLAARVASSGKCIYQALRCKEPPSSDRLAAMQILFEICPCFKFGFIAANGAIVEAVRDEKKVHIIDFDISQGTQYITLIQALAAMPGRRPHVRLTGVDDPETVQRSVGGMNIIGKRLEKLAEELGLPFEFRAVASKTSIVSPSMLNCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRMVKCLNPKLVTIVEQDMNTNTSPFLQRFVEAYNYYSAVFDTLDATLPRESQDRMNVERQCLAKDIVNIVACEGEDRIERYEVAGKWRARLTMAGFTPSPISTNVREAIRKLIIKQYCDRFKIKEEMGALHFGWEDKNLIVTSAWK	592

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Viun8g00979	592	MobiDBLite	consensus disorder prediction	61	80	-	-
Viun8g00979	592	PANTHER	OSJNBA0084A10.13 PROTEIN-RELATED	202	587	IPR005202	-
Viun8g00979	592	MobiDBLite	consensus disorder prediction	190	221	-	-
Viun8g00979	592	MobiDBLite	consensus disorder prediction	188	221	-	-
Viun8g00979	592	ProSiteProfiles	GRAS family profile.	212	592	IPR005202	-
Viun8g00979	592	Pfam	GRAS domain family	222	592	IPR005202	-
Viun8g00979	592	MobiDBLite	consensus disorder prediction	66	80	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun8g00979	Viun-Chr8	10807926	10811113	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun8g00979	1	592	GRAS Transcription Factor Family	AT1G21450	60.601	0.0	696

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRAS	Viun8g00979		GRAS	1.6e-134	CL0063

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun8g00979	-		-	gmx:100807048	993.03

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